Gene Bcen2424_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3005 
Symbol 
ID4450768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3317075 
End bp3317836 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID639695071 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_836646 
Protein GI116691023 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTGCC ACGATCGCCG AATCGGCGAT GAACGCGTGC GCGTGCCCCG CGCAGTGCCC 
TCTTTTCCAG CAAGGAGACC CGCAGTGAAC ATTCAGACAC GACGCACCGT CCTCGTGGCG
GCGGCGGTCG TCGCAGCGCT GTCCGGCTGC GCGACCGAAT CGTCGCGCAC GCTCGACGTG
CCGGCCGTCA GCAGCGCGCA GAAGCCGTAC GCGGGCAAGC CCGTCGCGAT CGCCGTCGGC
AAGTTCGACA ACCGCTCGAG CTACATGCGC GGCATCTTCT CCGACGGCAT CGACCGCCTC
GGCGGACAGG CGAAGACGAT CCTCGTCACG CGCCTGCAGC AGAGCCGCCG CTTCAACGTG
CTCGATCGCG AGAACCTCGA CGAGATCAGG CAGGAAGCGG GCTTCATGAA GAAGGCGCAG
GCCGTGAAGG GCGCGAACTA CGTGGTGACC GGCGACGTGA CCGAGTTCGG CCGCAAGGAC
GTCGGCGATC ATCAGCTGTT CGGCATTCTC GGCCGCGGCA AGACGCAGGT CGCGTACGCG
AAGGTCAACC TGAACATCGT CGACACGACG ACGTCGGAAG TCGTCGCATC GAGCCAGGGC
GCGGGCGAGT TCAGCCTGTC GAACCGCGAG GTGATCGGCT TCGGCGGCAC GGCCGGCTAC
GACTCGACGC TCAACGGCAA GGTGCTGGAC CTCGCGATCC AGGAAGCCGT GAACCATCTC
GTCGACCAGG TCGACGCCGG CGTGCTGAGG GCCGCGCAAT AA
 
Protein sequence
MTCHDRRIGD ERVRVPRAVP SFPARRPAVN IQTRRTVLVA AAVVAALSGC ATESSRTLDV 
PAVSSAQKPY AGKPVAIAVG KFDNRSSYMR GIFSDGIDRL GGQAKTILVT RLQQSRRFNV
LDRENLDEIR QEAGFMKKAQ AVKGANYVVT GDVTEFGRKD VGDHQLFGIL GRGKTQVAYA
KVNLNIVDTT TSEVVASSQG AGEFSLSNRE VIGFGGTAGY DSTLNGKVLD LAIQEAVNHL
VDQVDAGVLR AAQ