Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3005 |
Symbol | |
ID | 4450768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 3317075 |
End bp | 3317836 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639695071 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_836646 |
Protein GI | 116691023 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTGCC ACGATCGCCG AATCGGCGAT GAACGCGTGC GCGTGCCCCG CGCAGTGCCC TCTTTTCCAG CAAGGAGACC CGCAGTGAAC ATTCAGACAC GACGCACCGT CCTCGTGGCG GCGGCGGTCG TCGCAGCGCT GTCCGGCTGC GCGACCGAAT CGTCGCGCAC GCTCGACGTG CCGGCCGTCA GCAGCGCGCA GAAGCCGTAC GCGGGCAAGC CCGTCGCGAT CGCCGTCGGC AAGTTCGACA ACCGCTCGAG CTACATGCGC GGCATCTTCT CCGACGGCAT CGACCGCCTC GGCGGACAGG CGAAGACGAT CCTCGTCACG CGCCTGCAGC AGAGCCGCCG CTTCAACGTG CTCGATCGCG AGAACCTCGA CGAGATCAGG CAGGAAGCGG GCTTCATGAA GAAGGCGCAG GCCGTGAAGG GCGCGAACTA CGTGGTGACC GGCGACGTGA CCGAGTTCGG CCGCAAGGAC GTCGGCGATC ATCAGCTGTT CGGCATTCTC GGCCGCGGCA AGACGCAGGT CGCGTACGCG AAGGTCAACC TGAACATCGT CGACACGACG ACGTCGGAAG TCGTCGCATC GAGCCAGGGC GCGGGCGAGT TCAGCCTGTC GAACCGCGAG GTGATCGGCT TCGGCGGCAC GGCCGGCTAC GACTCGACGC TCAACGGCAA GGTGCTGGAC CTCGCGATCC AGGAAGCCGT GAACCATCTC GTCGACCAGG TCGACGCCGG CGTGCTGAGG GCCGCGCAAT AA
|
Protein sequence | MTCHDRRIGD ERVRVPRAVP SFPARRPAVN IQTRRTVLVA AAVVAALSGC ATESSRTLDV PAVSSAQKPY AGKPVAIAVG KFDNRSSYMR GIFSDGIDRL GGQAKTILVT RLQQSRRFNV LDRENLDEIR QEAGFMKKAQ AVKGANYVVT GDVTEFGRKD VGDHQLFGIL GRGKTQVAYA KVNLNIVDTT TSEVVASSQG AGEFSLSNRE VIGFGGTAGY DSTLNGKVLD LAIQEAVNHL VDQVDAGVLR AAQ
|
| |