Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2996 |
Symbol | |
ID | 4450538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 3307076 |
End bp | 3308191 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639695062 |
Product | extracellular solute-binding protein |
Protein accession | YP_836637 |
Protein GI | 116691014 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.625226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGCCT GCATTCTTCG CCAAGCCTGT TCCGTCGCCG CCCTCGCCGC CGCGGCCGCG CTCACGTCGG TCGCCAGCCC GTCGGCGCAT GCCGACGAGC TGAACGTCTA CAACTGGTCC GACTACATCG CGCCGGACAC GATCCCGAAC TTCCAGAAGC AGACGGGTAT TCACGTCAAG TACGACAACT ACGACAGCGA CGACACGCTC CAGGCGAAGC TGCTCGCCGG CAGTTCCGGC TACGACATCG TCGTGCCGAC CTCGAACTAC ATGGCCAAGC AGATCCAGGC CGGCGTGTAC CAGAAGCTCG ACAAGTCGAA GATTCCGAAC CTCGCGAACC TCGACCCGCT GCTGATGAAG ATGATCTCGG ATGCCGATCC GGGCAACCAG TACGGCGTGC CCTGGGCGTA CGGCACGGAC GGCATCGGCT ACAACGCGCA GGCGGTGAAG AAGGCGCTCG GCGACAAGGC GCCGGTCGAC AGCTGGGCGC TGGTGTTCGA TCCGGCCAAC ATGGAGAAGC TGAAGAGCTG CGGCGTGTCG TTCCTCGACC AGGCCGTCGA CGTGTTCGCC GCCACGCTGC AATACATGGG CAAGGACCCG AACAGCAAGA ACCCCGGCGA CTACCAGGCC GCATTCGAAG TCCTGAAGAA AGTCCGCCCG TACATCACCC AGTTCAACTC GTCCGGCTAC ATCAACGACC TCGCGAACAA CGACGTGTGC GTCGTGCTCG GCTGGTCCGG CGACGTCGGC ATCGCGCACC GTCGCTCGGC GGAAGCGAAG CGTTCGTACG ACATCAAGTT CTCGAATCCG AAGGAAGGCG GCCTGCTGTG GTTCGACGTG ATGGTGATCC CGAAGGATGC GCCGCATCCC GAGAGCGCGC TGAAGTGGAT CAACTACATT TCCGATCCGA AGGTCAACGC GGCGATCACC AACACGGTGT TCTACCCGAC CGCGAACAAG GCCGCGCATC AATTCGTCAC GCCGGCCGTC GCGCAGGACC CGACCGTCTA TCCGCCTGAA GACGTGCTGA AGAAGATGGT GCTGATGAAG CCGATGCCGG CCGACATCCT GCGCCTCGAG AACCGTCTGT GGGCCCAGTT GAAGACGGGC CACTGA
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Protein sequence | MRACILRQAC SVAALAAAAA LTSVASPSAH ADELNVYNWS DYIAPDTIPN FQKQTGIHVK YDNYDSDDTL QAKLLAGSSG YDIVVPTSNY MAKQIQAGVY QKLDKSKIPN LANLDPLLMK MISDADPGNQ YGVPWAYGTD GIGYNAQAVK KALGDKAPVD SWALVFDPAN MEKLKSCGVS FLDQAVDVFA ATLQYMGKDP NSKNPGDYQA AFEVLKKVRP YITQFNSSGY INDLANNDVC VVLGWSGDVG IAHRRSAEAK RSYDIKFSNP KEGGLLWFDV MVIPKDAPHP ESALKWINYI SDPKVNAAIT NTVFYPTANK AAHQFVTPAV AQDPTVYPPE DVLKKMVLMK PMPADILRLE NRLWAQLKTG H
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