Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2968 |
Symbol | |
ID | 4449086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 3280533 |
End bp | 3281609 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639695034 |
Product | porin |
Protein accession | YP_836609 |
Protein GI | 116690986 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAT TCGCTCGCCG TGCGTCGCGC ACGTCCGTCA AGCTGATCGC CGCGGCCGCC TGCGTGGCGG CCGCCGCACC CGTCCATGCG CAATCGAGCG TCTCGCTCTA CGGGCAGGTT GACGAATGGG TCGGCGCCAC CAAGTTCCCC GGCGGCGATC GTGCGTGGAA CGTGTCGGGC GGCGGCATGT CGACGTCGTA CTGGGGCCTG CACGGCGCAG AGGATCTCGG CGACGGCTAC AAGGCGATCT TCACGCTGGA GAGCTTCTTC CGTGCGCAGA ACGGCCAGTA CGGCCGCTTC CAGGGCGACA CGTTCTTCGC GCGCAACGCG TACGTCGGCA TCAGCTCGCC GTACGGCACG GTGACGGCGG GCCGCCTGAC GACGCACCTG TTCCTGTCGA CGATCCTGTT CAACCCGTTC TACGACTCGT ACACCTTCTC GCCGATGGTG TATCACGTGT TCCTCGGCCT CGGCACGTTC CCGACCTATC CGAGCGACCA GGGCGCGGTC GGCGATTCGG GCTGGAACAA CGCGGTGGGA TACACGTCGC CTTCGTTCGG TGGCCTGAAT TTCGGCGCGA TGTACGCACT CGGCAACCAG GCCGGCGACA ACCGTTCGAA GAAGTGGAGC GCGCAGTTCA ATTACGCGAA CGGCCCGTTC GCGGCGACCG CCGTGTATCA GTACGTGAAC TTCAACAACG GCCCGCAGGA CCTGAGCGCG CTCGTGACCG GCATGAAGAG CCAGGGCATC GCGCTGGTCG GCGCGACCTA CGACCTGAAG CTCGTGAAGC TGTTCGGCCA GTACATGTAT ACGAAGAACG ACCAGGTCGC GGGCAGCTGG CACGTCAACA CCGCGCAGGG CGGCGTGTCG GTGCCGATCG GCGTGGGCAA CGCGATGGCG TCGTATGCGT ATTCGCGCGA CGCGGGCGGC CTCGACCAGA CGCGCCAGAC GTGGGCCGTC GGCTACGACT ATCCGCTGTC CAAGCGCACC GACGTCTACG CGGCCTACAT GAACGACCAC ATCAGCGGCC TGTCGACCGG CAACACGTTC GGCGCAGGCA TCCGCGCGAA GTTCTGA
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Protein sequence | MKAFARRASR TSVKLIAAAA CVAAAAPVHA QSSVSLYGQV DEWVGATKFP GGDRAWNVSG GGMSTSYWGL HGAEDLGDGY KAIFTLESFF RAQNGQYGRF QGDTFFARNA YVGISSPYGT VTAGRLTTHL FLSTILFNPF YDSYTFSPMV YHVFLGLGTF PTYPSDQGAV GDSGWNNAVG YTSPSFGGLN FGAMYALGNQ AGDNRSKKWS AQFNYANGPF AATAVYQYVN FNNGPQDLSA LVTGMKSQGI ALVGATYDLK LVKLFGQYMY TKNDQVAGSW HVNTAQGGVS VPIGVGNAMA SYAYSRDAGG LDQTRQTWAV GYDYPLSKRT DVYAAYMNDH ISGLSTGNTF GAGIRAKF
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