Gene Bcen2424_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2917 
Symbol 
ID4450926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3221366 
End bp3224083 
Gene Length2718 bp 
Protein Length905 aa 
Translation table11 
GC content65% 
IMG OID639694983 
Productmethionine synthase 
Protein accessionYP_836558 
Protein GI116690935 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.978169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC ACATGATGCG CCTTGCCGGC CTCGAGCCGT TCAACGTCAC GCCCGGGACG 
CTCTTCATCA ACGTCGGCGA ACGCACCAAC GTCACCGGCT CGAAGGCGTT CGCACGGATG
ATCCTCAACG GCCAGTTCGA CGAGGCGCTC GCCGTCGCGC GCCAGCAGGT CGAGAACGGC
GCGCAGGTGA TCGACATCAA CATGGACGAG GCGATGCTCG ATTCGAAGGC GGCGATGGTG
CGCTTCCTGA ACCTGATTGC GTCGGAGCCG GACATCGCGC GCGTGCCGAT CATGATCGAC
TCGTCGAAGT GGGAGGTGAT CGAAGCCGGC CTCAAGTGCG TGCAGGGCAA GGCGATCGTG
AACTCGATCT CGCTGAAGGA AGGCGAGGAC GCGTTCCGTC ACCACGCGAA CCTGATCCGC
CGCTACGGCG CGGCCGCGGT CGTGATGGCG TTCGACGAAA CCGGCCAGGC CGATACCTAC
GCGCGCAAGA CCGAGATCTG CAAGCGCTCG TACGACTTCC TCGTGAACGA AGTCGGCTTC
CCGCCGGAAG ACATCATCTT CGACCCGAAC ATCTTCGCGG TCGCGACCGG CATCGAGGAG
CACAACAACT ACGCGGTCGA CTTCATCGAG GCGACCCGCT GGATCAAGCA GAACCTGCCG
CACGCGAAGG TGAGCGGCGG CGTGTCGAAC GTGTCGTTCT CGTTCCGCGG CAACGACCCG
GTGCGCGAGG CGATCCACAC CGTGTTCCTG TATCACGCGA TCCAGGCCGG GATGGACATG
GGCATCGTGA ACGCGGGCCA GCTCGGCGTG TACGCCGATC TCGACCCCGA ACTGCGCGAG
CGCGTCGAGG ACGTGATCCT GAACCGCCGC GACGACTCCA CCGATCGTCT GCTGGAGATC
GCCGACAAGT TCAAGGCAGG CGGCGCGAAG AAGGAAGAGA ACCTCGAGTG GCGCGACCAG
CCGGTCGAGA AGCGGCTCTC GCATGCGCTC GTGCACGGCA TCACGACCTT CATCGTCGAG
GATACCGAGG AAGTGCGCGC GAAGATCGCC GCGGCCGGCG GCCGTCCGAT CAACGTGATC
GAAGGGCCGC TGATGGACGG GATGAACATC GTCGGCGACC TGTTCGGCCA GGGCAAGATG
TTCCTGCCGC AGGTCGTGAA GTCGGCGCGC GTGATGAAGC AGGCGGTCGC GCACCTGATC
CCGTTCATCG AGGAAGAAAA GCGCCTGCTC GCGGAAGCGG GCGGCGACGT GCGCGCGAAG
GGCAAGATCG TCATCGCGAC CGTGAAGGGC GACGTGCACG ACATCGGCAA GAACATCGTG
TCGGTCGTGC TCCAGTGCAA CAACTTCGAA GTGGTCAACA TGGGCGTGAT GGTCCCGTGC
AACGAGATCC TCGCGAAGGC GAAGGTCGAA GGCGCGGACA TCATCGGGCT GTCGGGCCTC
ATCACGCCGA GCCTCGAGGA AATGGCGTAC GTCGCGTCCG AAATGCAGCG CGACGACTAC
TTCCGCGTGA AGAAGATTCC GCTGCTGATC GGCGGCGCCA CGACGTCGCG CGTGCACACG
GCCGTGAAGA TCGCGCCGCA CTACGAAGGC CCGGTCGTCT ACGTGCCGGA TGCGTCGCGC
TCGGTGTCGG TCGCGTCGAA CCTGCTGTCC GACGAAGGCG CGGCGAAGTA TCTGGACGAG
CTGAAGTCCG ACTACGAGCG GATTCGCGAC CAGCACGCGA ACCGCAAGGC GCAGCCGGTG
GTCACGCTCG CCGAAGCACG CGCGAACAAG ACCAAGGTCG ACTGGGCCGG CTACCAGCCG
GTGAAGCCGA AGTTCATCGG CCGCCGCGTG TTCAAGAATT ACGACCTGAA CGAGCTCGCG
AACTACATCG ACTGGGGCCC GTTCTTCCAG ACCTGGGACC TCGCGGGCCC ATACCCGGCG
ATCCTGAACG ACGAGATCGT CGGCGAATCG GCGCGGCGCG TGTTCTCCGA CGCGAAGTCG
ATGCTCGCGC GCCTGATCCA GGGCCGCTGG CTGACCGCGA ACGGCGTGAT CGCGCTGCTG
CCGGCCAATA CGGTCAACGA CGACGACATC GAGATCTACA GCGACGAGTC ACGCTCGGAA
GTGCTGCTCA CGTGGCGCAA CCTGCGCCAG CAGAGCGTGC GCCCGGTGGT CGACGGCGTG
ATGCGGCCGA ACCGTTCGCT CGCCGACTTC ATCGCGCCGA AGGAGTCGGG GGTGGCCGAC
TACATCGGGA TGTTCGCGGT GACGGCCGGC CTCGGCGTCG ACGTGAAGGA AAAGCAGTTC
GAAGCCGACC ACGACGACTA CAGCGCGATC ATGCTGAAGG CGCTCGCCGA CCGTTTCGCG
GAAGCGTTCG CCGAAGCGAT GCACGCGCGC GTGCGGCGCG AGCTGTGGGG CTATGCGAGC
GGCGAGACGC TCGACAACGA CGCGCTGATC GCCGAGAAGT ACGCGGGCAT CCGCCCGGCG
CCCGGCTATC CGGCTTGCCC CGACCACCTC GTGAAGCGCG ACATGTTCGA CGTGCTGCAC
GCGGACGAGA TCGGCATGAG CGTGACGGAT TCGCTCGCGA TGCTGCCGGC GGCGAGCGTG
TCGGGTTTCT ATCTCGCGCA CCCGGACAGC CGCTACTTCT CGGTCGGCAA AATCGGGCAG
GATCAGCTCG AGGACTACGC GCAACGCATG GCGCTGTCGC TGGACGACGC GCGCCGCGCG
CTCGCGCCGC AACTCTGA
 
Protein sequence
MTDHMMRLAG LEPFNVTPGT LFINVGERTN VTGSKAFARM ILNGQFDEAL AVARQQVENG 
AQVIDINMDE AMLDSKAAMV RFLNLIASEP DIARVPIMID SSKWEVIEAG LKCVQGKAIV
NSISLKEGED AFRHHANLIR RYGAAAVVMA FDETGQADTY ARKTEICKRS YDFLVNEVGF
PPEDIIFDPN IFAVATGIEE HNNYAVDFIE ATRWIKQNLP HAKVSGGVSN VSFSFRGNDP
VREAIHTVFL YHAIQAGMDM GIVNAGQLGV YADLDPELRE RVEDVILNRR DDSTDRLLEI
ADKFKAGGAK KEENLEWRDQ PVEKRLSHAL VHGITTFIVE DTEEVRAKIA AAGGRPINVI
EGPLMDGMNI VGDLFGQGKM FLPQVVKSAR VMKQAVAHLI PFIEEEKRLL AEAGGDVRAK
GKIVIATVKG DVHDIGKNIV SVVLQCNNFE VVNMGVMVPC NEILAKAKVE GADIIGLSGL
ITPSLEEMAY VASEMQRDDY FRVKKIPLLI GGATTSRVHT AVKIAPHYEG PVVYVPDASR
SVSVASNLLS DEGAAKYLDE LKSDYERIRD QHANRKAQPV VTLAEARANK TKVDWAGYQP
VKPKFIGRRV FKNYDLNELA NYIDWGPFFQ TWDLAGPYPA ILNDEIVGES ARRVFSDAKS
MLARLIQGRW LTANGVIALL PANTVNDDDI EIYSDESRSE VLLTWRNLRQ QSVRPVVDGV
MRPNRSLADF IAPKESGVAD YIGMFAVTAG LGVDVKEKQF EADHDDYSAI MLKALADRFA
EAFAEAMHAR VRRELWGYAS GETLDNDALI AEKYAGIRPA PGYPACPDHL VKRDMFDVLH
ADEIGMSVTD SLAMLPAASV SGFYLAHPDS RYFSVGKIGQ DQLEDYAQRM ALSLDDARRA
LAPQL