| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2894 |
|---|
| Symbol | |
|---|
| ID | 4450491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 3198116 |
|---|
| End bp | 3199219 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639694960 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_836535 |
|---|
| Protein GI | 116690912 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.457818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGAA TGGACGAGAT GCAAGAACCG CTGTTTACGA CGGTGAAGCT GGAGGACTTC
GTGCCGGCCG ATCACCCGTT GCGGCCGCTT CGGCTGCTGG TCAATCAAGC GCTGAAGCGG
CTCAATGGGC TGTTTGGCAC GATCTACGCG GATAGCGGCC GTGCGTCGAT TGCGCCGGAG
AAACTGCTGC GTGCATTGCT GCTGCAGGTG CTGTACTCGG TGCGCAGCGA GCGCATGTTG
ATGGAACAGA TGCGCTACAA CCTGCTGTTC CGTTGGTTCG TCGGACTGGC GATCGAAGAC
GCCGTCTGGG ACCACTCGGT GTTCTCCAAG AACCGTGATC GTCTGCTCGA GCACGAAGTG
GTCGAAGCGT TCTTTACCGA AGTCATGAGC TTGGCCGACA AGCAAGGGCT GCTGTCCAGA
GAACACTTCT CGGTCGATGG CACGCTGATC CAGGCTTGGG CCAGCCACAA GAGCTTTCGG
CCCAAGGACG GCTCGGACGA TCCACCAGCC GGCGGTGGTC GCAATGTCGA CACCGACTGG
AAGGGCAAGC GGCGCAGCAA CGATACGCAT GAATCGAGCA CCGATCCGGA CGCACGCCTG
TTCCGCAAGG GGCGGCAAAG CGGAGCCATC CTTTGTTATC AGGGGCACAT CCTGATGGAG
AACCGCTCGG GCTTGGTGGT CGGCGCGGTG GTCAGCCACG CTGACGGTTT CGGCGAACGC
GCAAGTGCGT TGCGCTTGCT CGACCGCGTG CCGGGTCGTC ACGCCAAGAC GCTCGGCGCC
GACAAGGGTT ACGACATGCG CGACTTTGTC CGGGATTGCC GGGCGCGCAA AGTGACGCCA
CACGTCGCGC GCAACGACGC GCATCAAGGC GGCAGCGCGA TCGACGGCCG CACCTCGCGG
CACGCCGGTT ATGGCATCAG CCAAGTGATT CGCAAACGCA TCGAAGAGCA CTTCGGCTGG
GGCAAGACCG TCGGCAGGAT TCGACAGACC GCGTATCGCG GTATCAAGCG AGTCGACCAG
CACTTCAAAC TGACGATGCT GGCGAGCAAC CTGACTCGAA TGGCTCGAAT ACTGGCAGCG
GTGCCACAAG GAGCGGCGCG ATGA
|
|---|
| Protein sequence | MRGMDEMQEP LFTTVKLEDF VPADHPLRPL RLLVNQALKR LNGLFGTIYA DSGRASIAPE
KLLRALLLQV LYSVRSERML MEQMRYNLLF RWFVGLAIED AVWDHSVFSK NRDRLLEHEV
VEAFFTEVMS LADKQGLLSR EHFSVDGTLI QAWASHKSFR PKDGSDDPPA GGGRNVDTDW
KGKRRSNDTH ESSTDPDARL FRKGRQSGAI LCYQGHILME NRSGLVVGAV VSHADGFGER
ASALRLLDRV PGRHAKTLGA DKGYDMRDFV RDCRARKVTP HVARNDAHQG GSAIDGRTSR
HAGYGISQVI RKRIEEHFGW GKTVGRIRQT AYRGIKRVDQ HFKLTMLASN LTRMARILAA
VPQGAAR
|
|---|
| |