Gene Bcen2424_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2893 
Symbol 
ID4450490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3196164 
End bp3197474 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content67% 
IMG OID639694959 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_836534 
Protein GI116690911 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTGT CTTCCCAAGG CCTCAAGTCC CTCGCTTCCT CCATCGCCTT CGGCACCGCC 
GCGCGCAACG TCGCGCTCGG CGTGATGCTG CCCGTCGCGC TCGCCTCGAC GATCGTCGTC
GCCGAGGCGA AGCCGGCCGC CAAGGCCAAG GCCGCGCATG CGGCGCCGGC CGCCGAGCAG
TTCACCGGCG CGCCCGCGAC CTACATGCCG GGCGCGGTGC CGCCGCCGGG CGTGAACGCG
CGCTCGTGGG TGCTCGTCGA CGCGACGAGC AACACGGTGC TCGCGTCGGG CAATGCGGAC
GAGCGCGTCG AGCCGGCGTC GTTGACGAAG CTGATGACGG CCTACCTCGT GTTCGAGGCG
CTCGACAAGA AGAAGATCTC GATGGAGCAG ATCGTCACGC CGAGCGACGC GGTGCGCCGC
GTCGGCCGCG ACGAGTCGCG CATGTTCATC GAGGCGAACA AGCCGGTGTC CGTGCACGAC
CTCGTGTACG GGATGATCAT CCAGTCGGGC AACGACGCCG CGATCGCGCT GGCCGAGCTC
GTCGGCGGCA GCGAGGGGCA GTTCGTCACG ATGATGAACG ACGAGGCAGG GCGCCTCGGC
ATGAAGGGCA CGCACTTCGC CGACGTGAAC GGCATGCCCG ATCCGAACCA CTACACGACG
GCCGGCGACC TCGCGAAGCT GTCGGCCCAC CTGATCCGCG ATTTTCCGCA GTACTACAGC
ATCTTCTCGG AGAAGGAATT CAAGTACAAC AACATCCGCC AGGGCAACCG CAACCGGCTG
CTGTGGCTCG ACCCGACGGT CGACGGCCTG AAGACCGGCC ATACGCAGGC GGCCGGTTAC
TGCCTGATCG CGTCGGCGAA GCGCGCGATC CCGGGCGTCG ACGGCCAGCG CCGCCTGGTG
TCGGTGATGA TGGGCGAGCA GAAGGAAAGC GAGCGTACGC AGGACAGCAT GAAGATGCTG
AACTACGGCT ACAGCGCGTT CGATTCGGTG CGCCTGTTCA AGGGCGGCCA GGCGATCTCG
ACGCCGCGCA TCTACAAGGG CAAGGACAAC ACCGTGCAGG TCGGCGTGAA GGGCGACCAG
TGGGCGACCG TGCCGCGCGG CCTCGGCGAC AAGGTCAAGA CCGAAGTCGA CGTCAACGCA
CCGCTGATCG CGCCGCTCGC CGAAGGCCAG CAGGTCGGCA CCGTGAAGAT CGTCGCCGAC
GGCAAGACGC TGTCCGAATT CCCGGTCGTC GCGCTGCAAG CCGTGCCGGA AGCGGGTATC
TTCGGACGTA TCTGGGACTC GATCCTGCTG ATGTTCAGCA AGAAGAAGTA A
 
Protein sequence
MRLSSQGLKS LASSIAFGTA ARNVALGVML PVALASTIVV AEAKPAAKAK AAHAAPAAEQ 
FTGAPATYMP GAVPPPGVNA RSWVLVDATS NTVLASGNAD ERVEPASLTK LMTAYLVFEA
LDKKKISMEQ IVTPSDAVRR VGRDESRMFI EANKPVSVHD LVYGMIIQSG NDAAIALAEL
VGGSEGQFVT MMNDEAGRLG MKGTHFADVN GMPDPNHYTT AGDLAKLSAH LIRDFPQYYS
IFSEKEFKYN NIRQGNRNRL LWLDPTVDGL KTGHTQAAGY CLIASAKRAI PGVDGQRRLV
SVMMGEQKES ERTQDSMKML NYGYSAFDSV RLFKGGQAIS TPRIYKGKDN TVQVGVKGDQ
WATVPRGLGD KVKTEVDVNA PLIAPLAEGQ QVGTVKIVAD GKTLSEFPVV ALQAVPEAGI
FGRIWDSILL MFSKKK