Gene Bcen2424_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2871 
Symbol 
ID4449871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3170134 
End bp3171486 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content70% 
IMG OID639694939 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_836514 
Protein GI116690891 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0598017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACC GGCTGCAAGT GATCTATATC GAAGACGATG CGCTCGTGCG CCGGGCGAGC 
GTGCAGAGCC TTCAACTGGC GGGCTTCGAC GTCGGCGGCT TCGAGTCGGC CGAGGCGGCC
GAGAAGGCGA TCGTCGCGGA TACCGCCGGC GTGATCGTCA GCGACATCCG ACTGCCCGGC
GCGAGCGGGC TCGACGTGCT CGCGCAGTGC CGCGAGCGCG TGCCGGACGT GCCGGTGATT
CTCGTCACCG GGCACGGCGA CATTTCGATG GCCGTCCAGG CGATGCGCGA CGGCGCGTAC
GACTTCATCG AAAAGCCGTT CGCGGCCGAG CGCCTGATCG AGACGGTGCG CCGCGCGCTC
GAGCGCCGCG AGCTCGTGCT CGAGAACCAC GCGCTGCGGC GCGAGCTGGC CGGGCAGAAC
GTGGTCGCGC CGCGCATCAT CGGCCGCAGC CCCGCGATCG AGCAGGTGCG CAAGCTGATC
GCGAACGTCG CGCCCACCGA CGCGTCGGTG CTGATCAACG GCGACACGGG CGCCGGCAAG
GAACTGATCG CGCGCAGCCT GCACGAGCTG TCGCCGCGCC GCGACAAGCC GTTCATCGCG
GTCAATTGCG GCGCGCTGCC CGAGCCGATG TTCGAGTCGG AGATGTTCGG CTACGAGCCC
GGGGCGTTCA CCGGTGCGGC GAAGCGGCGC GTCGGCAAGC TCGAATACGC GTCCGGCGGC
ACGCTGTTCC TCGACGAAAT CGAAAGCATG CCGCTCGCGC TGCAGGTGAA GCTGTTGCGC
GTGCTGCAGG ACGGTGTGCT GGAACGGCTC GGCTCGAACC AGCCGATCCG CGTGAACTGC
CGCGTGGTCG CGGCCGCGAA GGGCGACATG AGCGAGCTCG TCGCGGCCGG CACGTTCCGG
CGCGACCTGC TGTACCGGCT CAACGTCGTG ACGATCGCGC TGCCGCCGCT CGCCGAGCGC
CGCGAGGACA TCGTGCCGCT GTTCGAGCAC TTCATGCTCG ATGCGGCCGT GCGCTACGGG
CGGCCCGCGC CGGTGCTGAC CGACCGGCAG CGCGCGAGCC TGATGCAGCG CGACTGGCCG
GGCAACGTGC GCGAGCTGCG CAATGCGGCC GACCGCTTCG TGCTCGGCGT GGCCGACATG
CCGCCGGAAA CGGGCGCGGG CGACGACGCC GACAACGACC AGACGCTGAA GGAGCGCATC
GAGCAGTTCG AGCGCGCGGT GATCGCCGAG GCGCTGAACC AGACGGGCGG CGCGGTCGCC
GCGACGGCCG ACCGGCTGCA TGTCGGCAAG GCGACGCTAT ACGAGAAGAT GAAGCGCTAC
GGGCTGTCGG CGAAAGGCGA AACCGAGCGC TGA
 
Protein sequence
MANRLQVIYI EDDALVRRAS VQSLQLAGFD VGGFESAEAA EKAIVADTAG VIVSDIRLPG 
ASGLDVLAQC RERVPDVPVI LVTGHGDISM AVQAMRDGAY DFIEKPFAAE RLIETVRRAL
ERRELVLENH ALRRELAGQN VVAPRIIGRS PAIEQVRKLI ANVAPTDASV LINGDTGAGK
ELIARSLHEL SPRRDKPFIA VNCGALPEPM FESEMFGYEP GAFTGAAKRR VGKLEYASGG
TLFLDEIESM PLALQVKLLR VLQDGVLERL GSNQPIRVNC RVVAAAKGDM SELVAAGTFR
RDLLYRLNVV TIALPPLAER REDIVPLFEH FMLDAAVRYG RPAPVLTDRQ RASLMQRDWP
GNVRELRNAA DRFVLGVADM PPETGAGDDA DNDQTLKERI EQFERAVIAE ALNQTGGAVA
ATADRLHVGK ATLYEKMKRY GLSAKGETER