Gene Bcen2424_2793 details

Gene Information

• Locus tag: Bcen2424_2793
• ID: 4449533
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 3089778
• End bp: 3090317
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639694860
• Product: putative PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_836436
• Protein GI: 116690813
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.470556
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACATG CCTTGATATC GCCGAACATG GAAAATCAGT CCGCCGCCGC AAGGAGACCC 
CAGGCCGCCC AATCGCCTGC CAACATGAAT CGCCTAGCCA AAATCCTGCC CATAGAGAAC 
GTCGTCATCG ACCTCTCGGT CACCAGCAAG AAACGCGTCT TCGAACAAGC CGGGCTGATG 
TTCGAGAATC AGAACGGCAT CGGCCGCAGC ACCGTCACGG ACAACCTGTT CGCGCGCGAG 
CGCCTCGGTT CGACCGGGCT CGGCGAAGGT GTCGCGATTC CGCACGGCCG CATCAAGGGC 
CTCAAGCACC CGCTCGCCGC GTTCGTCCGC CTCGCCGATG CGATCCCGTT CGAAGCGCCC 
GACGGCCAGC CGGTCGGCCT CCTGATCTTC CTGCTCGTTC CCGAGCAAGC CACCCAGCAG 
CACCTCGAGA TCCTGTCGGA AATCGCGCAA CTGCTGTCCG ATCGCGACGC ACGCGAGCGT 
CTGCACAACG AAACGGATAT CGCCGAGTTG CATCGCCTGC TCACTCAGTG GCAACCTTGA 

 

Protein sequence

MPHALISPNM ENQSAAARRP QAAQSPANMN RLAKILPIEN VVIDLSVTSK KRVFEQAGLM 
FENQNGIGRS TVTDNLFARE RLGSTGLGEG VAIPHGRIKG LKHPLAAFVR LADAIPFEAP 
DGQPVGLLIF LLVPEQATQQ HLEILSEIAQ LLSDRDARER LHNETDIAEL HRLLTQWQP