Gene Bcen2424_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2789 
Symbol 
ID4448113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3085985 
End bp3086650 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID639694856 
ProductOstA family protein 
Protein accessionYP_836432 
Protein GI116690809 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.156758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAC CGTTCCCTCG ACAGATTTCC GGCGGCGCTG CGCGCGCCGT CCGCGCCGCG 
CTCGCCGCGA CGCTCGTGGC GCTCCCGCTC ATCGGGCTGG CGCCGCTCGC CCATGCCGAG
AAGGCCGACC AGAACAAGCC GATCAACGTC GAGGCCGACA ACCTGACCTA TGACGATCTG
AAGCAGGTGA CGGTCGCGAC CGGCAACGTC GTGATCACGA AGGGCACGAT CATCATCAAG
GGCGACCGCG TCGAAGTGCG CCAGGACCCG GAAGGCTATC AGTACGCGAC GTCGTTCGGC
AGCGGCAAGA AGCACGCGAC GTTCCGCCAG AAGCGCGAAG GCCTCGACGA ATACATCGAC
GGCGACGCCG AGCGCATCGA CTACGACGGC AAGCAGGATC TCACCACGCT GACCACCGCC
GCGACCGTGC GCCGCCTGCA GGGCACGTCG ACGATCGCCG ACACCGTGCA CGGCAGCGTG
ATCACGTACG ACGGCCAGCG CGACTTCTAC ACTGCGAAGG GCGGCAAGGA CGTCGCGGCG
CCGGGCAACC CGAACGGCCG CGTGCGCGCG ATGCTGTCGC CGAAGAGCGG CGGCCCCGCG
CCGCTGAACG GGGCGCCGGC CAAGCTGTCG CCGTCGACCA CGATCCAGGG GGCGCCCGGC
CAATGA
 
Protein sequence
MNEPFPRQIS GGAARAVRAA LAATLVALPL IGLAPLAHAE KADQNKPINV EADNLTYDDL 
KQVTVATGNV VITKGTIIIK GDRVEVRQDP EGYQYATSFG SGKKHATFRQ KREGLDEYID
GDAERIDYDG KQDLTTLTTA ATVRRLQGTS TIADTVHGSV ITYDGQRDFY TAKGGKDVAA
PGNPNGRVRA MLSPKSGGPA PLNGAPAKLS PSTTIQGAPG Q