Gene Bcen2424_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2787 
Symbol 
ID4448111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3084810 
End bp3085346 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content72% 
IMG OID639694854 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_836430 
Protein GI116690807 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.546019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAG CGCTGACTGC GGCCGAACGC GCGAGCCGCG TGAAGCTGAT GATTTTCGAC 
GTCGACGGCG TGCTGACCGA CGGCGGCCTG CTGTTTACCG CGGCCGGCGA CGCGATGAAG
TCGTTCAATT CGCTCGACGG CCACGGCGTG AAGCTGCTCG GCGAAGCCGG CATCGCGACC
GCGATCATCA CGGGCCGCCG CTCGGACATC GTCGCGGCGC GCGCGAAGGA AATGAAGATC
GCGCACCTGT TCCAGGGCGT CGAGAACAAG CTCACCGTGT TCGGCGAGCT GATCGCGTCG
CTCGGCCTGA CGGCCGACGC CTGCGGCTAC ATGGGCGACG ACTGGCCCGA CCTGCCGGTG
ATGCTGCGCT GCGGCTTCGC GACGGCCCCC GCGAACGCGC ACCCCGAGGT GATCGCCCGC
GCGCACTGGG TCGCCGAGGC CCGCGGCGGC CACGGCGCCG TGCGCGAGGT CTGCGATGCG
ATCCTGCGCG CGCAGCGCCG CTACGACGCG CTGCTCGCCG CCGCCTGCGG AGCCTGA
 
Protein sequence
MSAALTAAER ASRVKLMIFD VDGVLTDGGL LFTAAGDAMK SFNSLDGHGV KLLGEAGIAT 
AIITGRRSDI VAARAKEMKI AHLFQGVENK LTVFGELIAS LGLTADACGY MGDDWPDLPV
MLRCGFATAP ANAHPEVIAR AHWVAEARGG HGAVREVCDA ILRAQRRYDA LLAAACGA