| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2741 |
|---|
| Symbol | |
|---|
| ID | 4451145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 3038259 |
|---|
| End bp | 3039197 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639694808 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_836384 |
|---|
| Protein GI | 116690761 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGT CCGCTTCCCC GTCCGCTCCG CCTGCCGCCG AGCCGCATCC GGCTCAGGCC
GCCCCGCCGG TCCTCGACAT CGTCGCGCGG ATCGCCGAAT GCGCGCCCGA GCTGCGCGAA
GCCGAGCGCA AGGTTGCCGC GTTCATCCTC GCCGATCTGG CGCGCGCCGC GCATGCGAGC
ATCGGCGCGC TCGCGCGCGA CGCGGAGGTC AGCGTCGCGA CGGTCACGCG TTTCGCGAAG
GCCGTCGGCT GCCGCGACGT GCGCGAACTG AAGGTGCTCG TCGCGCAGGC GGCGGCCGTC
GGTCAGCGTT TCCTGGTGCC GTCCGACGAC GCGCCGGCCG ACGACGCGAG CCCCGCATCG
ATGGTCTACG ACGAGATTCG CGTGGCGCTC GCGCACAACC ACCAGTTGCT GCGCAACACG
TCGTTCGACG CGGCGGCCGA CCTGCTCGCC GGCGCGAAGA TGACGTACGT GTACGGGCAG
GGCGGCGGTT CGACCGCGCT GGCCGACGAG CTGCGCTTCC GGCTCGTGCG TTTCGGCCGG
CCGGTCGCGA GCTACCAGGA CAGCCTGCTG CAACGGATGG TGGCCGCGAC GCTGTCGGGC
GACACCGTCG TCGTCGCGTT GTCGGTGAGC GGGCGCGTGC CCGAGCTGCT CGAGAGCTGC
CGGCTCGCGA AGCGCTACGG CGCGAAGCTG ATCGCGATCA CCGCGCCGGC GTCGCCGCTC
GCGAAGCTTG CCGACCACCT GATCCCGGTC GTCGCGTTCG AAACCGATTT CATTTACAAG
CCGTCGACCT CGCGCTACGC GATGATGATG GCGATCGACG TGCTCGTCAC CGGCGTCGCG
CTGCGGCTCG GCGATGCGGG CCGTGAATCG CTGCGCCGCA TCAAACACGC GCTCGATGCG
CACCGCGGCG GCGGAGACCG TCAACCGGTA GGAGACTGA
|
|---|
| Protein sequence | MNTSASPSAP PAAEPHPAQA APPVLDIVAR IAECAPELRE AERKVAAFIL ADLARAAHAS
IGALARDAEV SVATVTRFAK AVGCRDVREL KVLVAQAAAV GQRFLVPSDD APADDASPAS
MVYDEIRVAL AHNHQLLRNT SFDAAADLLA GAKMTYVYGQ GGGSTALADE LRFRLVRFGR
PVASYQDSLL QRMVAATLSG DTVVVALSVS GRVPELLESC RLAKRYGAKL IAITAPASPL
AKLADHLIPV VAFETDFIYK PSTSRYAMMM AIDVLVTGVA LRLGDAGRES LRRIKHALDA
HRGGGDRQPV GD
|
|---|
| |