| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2710 |
|---|
| Symbol | |
|---|
| ID | 4451027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 3000614 |
|---|
| End bp | 3001972 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639694777 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_836353 |
|---|
| Protein GI | 116690730 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA CCCTTCGTTT CGCGGCAGTC GTGTCCAGCC TCGCCGCGTC CGCCGCGCTG
CTCGTCGCCG CGCCGGCCGC GGCGCAGGCG CTCGGTTCGC AAGGTGCGCA GCTCGCCGAC
GAAGTCGTCG CGGTCGTCAA CAACGACGTG ATCACGGGCC GCGAACTCGA CCAGCGCGTC
GGCCTGATCG CGCGCCGGCT GCAGCAGCAG AACGCGCCGG TGCCGCCGGC CGACCAGCTG
CGCGCGCAGG TGCTGAACCA GATGGTGCTC GAGCGTATCC AGGTGCAGAA GGCCAAGGAC
GACGGAATCC GTATCGACGA CGCGACCGTG CAGGCCACGC TGCAGCGTCT CGCGCAGGCG
AACGGGATGA CGCTCGACCA GTACCGCGGG CGCCTCGAGG CGCAAGGCGT GCCCTGGAGC
ATCTTCACGA ACGACGCGCG CACCGAGCTG ATGCTGTCGA AGCTGCGCGA GCGCGAGGTC
GACGGCAAGA TCACGGTGTC GGACGCCGAG GTCGCGAACT ACATCGCGAG CCAGCGCGGG
CCGAACGCGT CGCAGCAGCA GGACCTGCGC TTCCAGCACA TCTTCATCAA GGCGCCCACC
AACGCGCCGC AGGCCGACAT CGAGGCCGCG CAGAAGAAGG CCGACGCGCT GCTGCAGCAG
GCGAAGTCGG GCGCCGATTT CGAGCGCCTC GCGAAGAACA ACTCCGAAGC GAACGACGCG
AAGAAGGGCG GCGATCTCGG CTTCAAGTCG CCGAGCGCGC TGCCGGCCGA CGTCGTCGAC
GCCGCGTCGA AGCTGCGCCC GGGCCAGGTC AACCCGACGC TGATCCGCGT GCCGGACGGC
TTCGAGATCG TGCGCCTCGT CGATCGCCGC CAGAGCCAGG GCGCGAGCGC CGCGGCGCCG
AAGATCGTCC AGACGCACGT GCGCCATATC CTGCTGCGCG TCGGCGAAGG CAAGTCCGAA
GGCCAGGCGC GCCAGCAACT GGTCGACATC CGCAACCAGG TCGAGGCCGG CGGCGATTTC
GCGAAGTTCG CGCGCACCTA TTCGCAGGAC GGTTCCGCGT CGCAGGGCGG CGATCTCGGC
TGGATCAGCC CGGGCGAGAC CGTGCCGGAA TTCGAGCGCG CGATGAACAA CCTGCAGGAC
GGCCAGATCA GTCAGCCGAT TCGTACCGAA TACGGCTACC ACCTGATCCA GGTGCTGAAC
CGCCGCGAGG CGGAAGGGTC GGTGCAGCAG CAGATGGACA TCGCCCGTCA GGCGATCGGC
CAGCGCAAGG CCGAGCAGGC GTATGCCGAC TGGCTGCGCG AGCTGCGCGA CTCGTCGTAC
GTGCAGTACA AGATCGGCGG CGTCGGCCCG GCGAACTGA
|
|---|
| Protein sequence | MKKTLRFAAV VSSLAASAAL LVAAPAAAQA LGSQGAQLAD EVVAVVNNDV ITGRELDQRV
GLIARRLQQQ NAPVPPADQL RAQVLNQMVL ERIQVQKAKD DGIRIDDATV QATLQRLAQA
NGMTLDQYRG RLEAQGVPWS IFTNDARTEL MLSKLREREV DGKITVSDAE VANYIASQRG
PNASQQQDLR FQHIFIKAPT NAPQADIEAA QKKADALLQQ AKSGADFERL AKNNSEANDA
KKGGDLGFKS PSALPADVVD AASKLRPGQV NPTLIRVPDG FEIVRLVDRR QSQGASAAAP
KIVQTHVRHI LLRVGEGKSE GQARQQLVDI RNQVEAGGDF AKFARTYSQD GSASQGGDLG
WISPGETVPE FERAMNNLQD GQISQPIRTE YGYHLIQVLN RREAEGSVQQ QMDIARQAIG
QRKAEQAYAD WLRELRDSSY VQYKIGGVGP AN
|
|---|
| |