| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2700 |
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| Symbol | |
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| ID | 4450841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 2989505 |
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| End bp | 2990995 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639694767 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_836343 |
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| Protein GI | 116690720 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00571929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCTCA CGACGACGCT CGTCGCGCGG CAGCGCCCGG CCGACGCGCT CGCGCTCGCC
GAATGCGCGG TGCGCGTGCA GCCGGGCGCG GCCACGCACT TCAACCACGG CTACGCGCTG
CAGATGGCCG GCCGTCACGC GGATGCGGTC GCGCCGTACC GCGCGGCGCT CGCGATCGAT
GCCGGCTGGC CGTCGCTGCG CAACAACCTC GCGATCGCGC TGCGCTTGTC GGGCGCGGAT
CGCGCGGAAG AAATCGCGCT GCTCGACGCG GCCGTGAAGC ACGATCCGCG GGACGTGCAG
GCATGGATCA ACCTCGTCGT CGCGCGGATC GCGACGCACG ACCTGGACGC TGCGCTCGCG
TGCGCAGCGC GGCTCGCCGA CCTCGCGCCC GACAACGCGC TCGCGATGAA CAACGTCGCG
ATGGCGATGA AGGAGGCGCA GCGCTGGGAC GAGGCCGAGC GCCATGCGGC GCGCGCATGC
GAGCTGGCGC CCGACGATGC GTCGTTCCGT TTCAATCTCG CGATCATCCA GCTCGTGCGC
GGCAACCACG CGGCCGGCTG GCGCGGCCAC GAGGCGCGCT GGGACGGCGC GGGCGAGTTG
CGCGGCCGCC GGCCGGCGCT GCCGGGCCCG CGCTGGCAGG GCGAGCCGCT CGCCGGCAAG
ACGCTGCTGG TGTGGGGCGA GCAGGGGCTC GGCGACGTGC TGCAGTTCTG CCGCTTCGTC
GTGCCGCTCG CCGAGCGCGT GCATCGCGAG GGCGGCCGGC TCGCGTGGAA TACGTTTCCG
GCGCTCGGCA CGCTGATGCA GCGCAGCCTC GGTGCGCACG CGGACGTGTT CGGCGCGGGC
GGCGGCATCG ATGCGTTGCC GGCATTCGAT TACGAAGTGC CGCTGATCGG CCTGCCGCTG
ATGCTCGGCA TGGAGGCGTC GACGCTCGCC GCCTCGGTGC CGTACCTGCG GGCCGAGCCG
GGTGCTCGCG ACGCGTGGCG CGCGCGGCTC GCCCGCGACG GCCGGCTGAA GGTCGGGCTC
GTGTGGACGG GCAGTGCGGG CCACCAGCGC AATCCGTTCC GGCGCGTCGG GCTCGAGCGC
TACGCCGACG CGTTTCGCGG CATCGACGGC GTCACGTTCT ATTCGCTCCA GCCGGGTGCG
GACACGGACG TCGCCGCCGC GCGCGCGGCC GGTTTCGCGA TCGAGGACTA CACGGCCGAA
TTGACGAGTT TCGACGATAC GGCCGCGTTC ATCGGCGCGC TGGATCTCGT GATCACCGTG
TGCACGTCGG TCGCGCATCT GGCCGGCGCG CTCGGCGCGC GCACCTGGGT GCTGCTCGAC
GTGAATCCGC ACTGGCCGTG GCTGCTCGAG CGCCGGGACA GCCCGTGGTA TCCGACCGCG
ACGTTGTACC GGCAGCCGAC GTTCGGCGCG TGGGCGCCGG TGATGGAGGA AGTCAGCCGC
GATCTGCGGC GCATCGCCGC GCAGCCGGAG CAACTGGGCC AACTGGACTA A
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| Protein sequence | MRLTTTLVAR QRPADALALA ECAVRVQPGA ATHFNHGYAL QMAGRHADAV APYRAALAID
AGWPSLRNNL AIALRLSGAD RAEEIALLDA AVKHDPRDVQ AWINLVVARI ATHDLDAALA
CAARLADLAP DNALAMNNVA MAMKEAQRWD EAERHAARAC ELAPDDASFR FNLAIIQLVR
GNHAAGWRGH EARWDGAGEL RGRRPALPGP RWQGEPLAGK TLLVWGEQGL GDVLQFCRFV
VPLAERVHRE GGRLAWNTFP ALGTLMQRSL GAHADVFGAG GGIDALPAFD YEVPLIGLPL
MLGMEASTLA ASVPYLRAEP GARDAWRARL ARDGRLKVGL VWTGSAGHQR NPFRRVGLER
YADAFRGIDG VTFYSLQPGA DTDVAAARAA GFAIEDYTAE LTSFDDTAAF IGALDLVITV
CTSVAHLAGA LGARTWVLLD VNPHWPWLLE RRDSPWYPTA TLYRQPTFGA WAPVMEEVSR
DLRRIAAQPE QLGQLD
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