| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2621 |
|---|
| Symbol | |
|---|
| ID | 4448084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2903965 |
|---|
| End bp | 2905104 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639694687 |
|---|
| Product | phospholipase/lecithinase/hemolysin-like protein |
|---|
| Protein accession | YP_836264 |
|---|
| Protein GI | 116690641 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.614559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAC AACAACACGC ACCTTCCCGC AGCCGGCTGC GCATGCTGCG CACCGCGCAG
GTCGCGATCG CCGGCGCCGC GCTCGCGCTG CTCGCCGCAT GCGGCGGCGG TGACGACAAC
AACGGCAGCA GCGCGTCGAA CACGCCGCCG TCGGGCGTGA AGATGCAGGT CGTGTCGTTC
GGCGACAGCC TGTCCGACGT CGGCACCTAC TCGCAGATCA AGCTCGGCTT CGGCGGCGGC
CGCTTCACGA CCAACCCGGG CCAGGTCTGG ACGCAGGACG TCGCGCAGTA CTACGGCGAC
ACGCTGCAGC CCGCGAACCA GGGCGGCTTC GGCATTCCGC TGCAGGCCAC CGGCGGCCTC
GGCTACGCGC AGGGCGGCTC GCGCGTGACG CTGCAGCCGG GCATCGGCCA TGCGGACGCC
AGCGTGCCGA ACCCCGACTA CGCACAGGCG ACCACCACGC CGATCGCGGA CCAGGTCAAG
CAGTACCTGA CGCAGCACGG CAGCTTCAAC GCCGGCCAGA TCGTGCTGAT CAACGGCGGC
GCGAACGACA TCTTCTACCA GGCCCAGGTC GCACAGGCGC AAGGCAACAC GCCGGCCGCG
CAGCTCGCGG CCGCGCAGGC GATCGGCCTG GCCGCGCAGC AGCTCGGCGG GATCGTCCAG
CAGATCGTCG CGGCAGGCGC GACGCACGTG TTCGTCTCGA ACGTGCCGGA CATCGGCGGC
ACGCCGCTCG CGCTGCAGGG CGGCACGCAG GCCGCGTTCA CGCAACTGTC GGGGCTGTTC
AACAAGACGC TGGTCGGCAC GCTCGCCGCG CTGAAGGTCG ACCCGACGAA GTATGTGGTG
GTCGATGCGT TCACGTGGCA GGACGGCATC GCGGCCAACT ACCAGGCGAA CGGCTTCAGC
GTGTCGAATA CCGACACCGC GTGCAACCTG AAGGCGATGG TCCAGGCCGC CACGCAGTAC
GGCGTCGCGA ACGCGACCGC GTTCGGCTCG TCGCTGTTCT GCTCGCCGCA GACCTACACG
GTCGCGAACG CGGACCAGAC CTACATGTTC GCCGATACGG TCCACCCGAC GACGCACCTG
CATGCGCTGT TCGCGCAGTA CGTCCAGCAG CAGATCGCGA AATCGGGCGT CGGCAAGTAA
|
|---|
| Protein sequence | MQTQQHAPSR SRLRMLRTAQ VAIAGAALAL LAACGGGDDN NGSSASNTPP SGVKMQVVSF
GDSLSDVGTY SQIKLGFGGG RFTTNPGQVW TQDVAQYYGD TLQPANQGGF GIPLQATGGL
GYAQGGSRVT LQPGIGHADA SVPNPDYAQA TTTPIADQVK QYLTQHGSFN AGQIVLINGG
ANDIFYQAQV AQAQGNTPAA QLAAAQAIGL AAQQLGGIVQ QIVAAGATHV FVSNVPDIGG
TPLALQGGTQ AAFTQLSGLF NKTLVGTLAA LKVDPTKYVV VDAFTWQDGI AANYQANGFS
VSNTDTACNL KAMVQAATQY GVANATAFGS SLFCSPQTYT VANADQTYMF ADTVHPTTHL
HALFAQYVQQ QIAKSGVGK
|
|---|
| |