| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2591 |
|---|
| Symbol | |
|---|
| ID | 4450144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2868971 |
|---|
| End bp | 2870077 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639694657 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_836234 |
|---|
| Protein GI | 116690611 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0994309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCG TGCTCCTGCG CAACATCGCG AAGCGCTACG ACGACACCGA AGTGCTGCGC
AACGTGAACC TCGACATCGC CGACGGCGAA TTCGTCGTGT TCGTCGGCCC GAGCGGCTGC
GGCAAATCCA CGCTGATGCG GATGATCGCC GGCCTGGAAG ACATTTCGAA CGGCGACCTG
CTGATCGACG GCGCGAAGGT CAACGACGTG CCGAGCGCGA AGCGCGGCAT CGCGATGGTG
TTCCAGTCGT ATGCGCTGTA CCCGCACATG ACGCTGTACG ACAACATGGC GTTCGGCCTG
AAGCTCGCCG GCGCGAAGAA GCCCGAGATC GACCAGGCCG TGAAGCAGGC CGCGAAGATC
CTGCACATCG ATCACCTGCT CGACCGCAAG CCGAAGCAGT TGTCGGGCGG CCAGCGGCAG
CGCGTCGCGA TCGGCCGCGC GATCACGAGG AAGCCGAAGG TGTTCCTGTT CGACGAACCG
CTGTCGAACC TCGACGCCGC GCTGCGCGTG AAGATGCGGC TGGAGTTCGC GCGGCTGCAC
GACGAGCTGA AGACGACGAT GATCTACGTG ACGCACGACC AGGTCGAGGC GATGACGCTC
GCCGACAAGA TCGTCGTGCT GTCGGGCGGC GCGGTGCAGC AGGTCGGCAC GCCGAACGCG
CTGTATCACG CGCCGGCGAA CCAGTTCGTC GCGGGCTTCA TCGGCTCGCC GAAGATGAAC
TTCCTGAAGG GCACGGTCGA ATCGGCCGAT GCGGGCGGCG TGCTCGTGCG CTTCGACAGC
GGCGAGACGC AGCATGTCGC GGTCGATGCG GCGGGGCTGC AGCGCGGCGC CGCGGTGACC
GTCGGCGTGC GGCCCGAGCA TCTGCTGGTC GATGCGGCGG CGGGCGTCGC CGCGCGGACG
ATGGCCGTCG AGTCGCTCGG CGACGCCGCG TACCTGTATG CGGAGTCGGC CGTCGCACCG
GACGGGCTGA TCGCGCGGAT TCCGCCGCTC GACACGTACC GCACCGGCGA GGCGCTGCGC
GTGCATGCGC AGGCCGAGCA CTGCCACCTG TTCGACGAGC ACGGGCAGGC GCTGCGGCGG
CTCAGCGCGC ACGCGAAGGC GGCTTGA
|
|---|
| Protein sequence | MASVLLRNIA KRYDDTEVLR NVNLDIADGE FVVFVGPSGC GKSTLMRMIA GLEDISNGDL
LIDGAKVNDV PSAKRGIAMV FQSYALYPHM TLYDNMAFGL KLAGAKKPEI DQAVKQAAKI
LHIDHLLDRK PKQLSGGQRQ RVAIGRAITR KPKVFLFDEP LSNLDAALRV KMRLEFARLH
DELKTTMIYV THDQVEAMTL ADKIVVLSGG AVQQVGTPNA LYHAPANQFV AGFIGSPKMN
FLKGTVESAD AGGVLVRFDS GETQHVAVDA AGLQRGAAVT VGVRPEHLLV DAAAGVAART
MAVESLGDAA YLYAESAVAP DGLIARIPPL DTYRTGEALR VHAQAEHCHL FDEHGQALRR
LSAHAKAA
|
|---|
| |