Gene Bcen2424_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2563 
Symbol 
ID4449939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2838043 
End bp2839557 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content69% 
IMG OID639694629 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_836206 
Protein GI116690583 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATCA AACCGTTCCG CTCGATCGAA TCGGCGGCCA CCGCGACGCA CAACTGGCGG 
CGCCGTCAGA TCCTGCGCGC GGGGGCGTCG ACGCTGGTGC TCGGTCTCGT CGCGCCGCGG
CTCGCGCACG CGTCGTCGGT GCTCGGCGTG CGCGTGTGGC CCGCACGCGA TTACACGCGC
GTCACGATCG AATCCGACCA GCCGCTGCAG AATAGCCAAC AGCTGCTGCA GGGTCCCGAC
CGTCTCGTCG TCGACCTGAG CGGCCTCGAC CTCGACCAGG CGCTGCGCGA CCTCGTCTCG
AAGATCGCGC CGAACGATCC GCAGATCCAG TCGGTGCGCG TCGGCCAGTA TCAGCCACAC
GTCGTGCGGA TGGTGTTCGA CCTGAAAGGC TCGGTGAAGC CGCAGGTGTT CACGCTGCCG
CCCGTCGGCA CGTACAAGTA CCGGCTGGTG TTCGACCTGT ATCCGGCCGT CGCGCCCGAT
CCGCTGTCCG ACCTGATCGC GCAGACGGAA CGCAAGGAAC AGGCGCTCAA CGACACCGCG
CGCGCGCAGC AGATGCAGCC GCCGTCCACG CTGGCGGGCC CCGGCACCCC GCCGCCCGGC
GCGGGCGACA ACAGCGACGC ATTCTTCCAG CGTTTCGCGC AGAACACGCC GGCCACGCCG
CACGCGCCGC CGGCCGCCGG CACGCCGTCG ACGCCCGCGA AGCCGGCCGT CAAGCCGCCG
CCCGTCATCG CGCGCCGCGA CGACAGCGAC GACGACGGCG ACACCTACAA GTTCACCGCG
CCGAAATCCG GCAAGGGCGG CACCGTGCGT CTGCTGACGG TCGCGATCGA CCCGGGCCAC
GGCGGCGAGG ATCCGGGCGC GATCGGCGGC AACGGCACGT ACGAGAAGCA CATCGCGCTC
GACATCGCGA AGAAGCTGCG CGCGAAGATC GACGCCGCGC CGAACATGCG CGCGATGATG
ACGCGCGACG CCGACTTCTT CGTGCCGCTG AACGTGCGCG TGCAGAAGGC GCGCCGCGTC
GGCGCGGATC TCTTCGTGTC GATCCACGCG GATGCGTTCA CGACGCCGTC CGCACGCGGC
TCGTCGGTGT TCGCGCTGTC CGACCACGGC GCGACGAGCG CCGCGGCGCG CTGGATGGCG
AACAAGGAGA ATTCGTCGGA CCTGATCGGC GGCATCAACA TCAAGACGGC GGACGCGGCC
GTGAACCGCG CGCTGTTCGA CATGTCGACG ACCGCGCAGA TCCGCGACTC GCTGCGCTAC
GGCAACTACG TGCTGAAGGA AGTCGGCGGC ATCAACAAGC TGCACAAGGG CTCGGTCGAG
CAGGCCGGGT TCGCGGTGCT GAAGGCGCCC GACATTCCGT CGATCCTCGT CGAGACCGCG
TTCATCAGCA ACCCGGACGA AGAGCGCCGG CTCAACGACG ACAGCTATCG CGACGAGATG
GCCGACGCGA TCTTCCGCGG CATCAAGCGC TATTTCGCCG CGAATCCGCC GCTCGCGAAG
AGCCGGATGG CCTGA
 
Protein sequence
MLIKPFRSIE SAATATHNWR RRQILRAGAS TLVLGLVAPR LAHASSVLGV RVWPARDYTR 
VTIESDQPLQ NSQQLLQGPD RLVVDLSGLD LDQALRDLVS KIAPNDPQIQ SVRVGQYQPH
VVRMVFDLKG SVKPQVFTLP PVGTYKYRLV FDLYPAVAPD PLSDLIAQTE RKEQALNDTA
RAQQMQPPST LAGPGTPPPG AGDNSDAFFQ RFAQNTPATP HAPPAAGTPS TPAKPAVKPP
PVIARRDDSD DDGDTYKFTA PKSGKGGTVR LLTVAIDPGH GGEDPGAIGG NGTYEKHIAL
DIAKKLRAKI DAAPNMRAMM TRDADFFVPL NVRVQKARRV GADLFVSIHA DAFTTPSARG
SSVFALSDHG ATSAAARWMA NKENSSDLIG GINIKTADAA VNRALFDMST TAQIRDSLRY
GNYVLKEVGG INKLHKGSVE QAGFAVLKAP DIPSILVETA FISNPDEERR LNDDSYRDEM
ADAIFRGIKR YFAANPPLAK SRMA