| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2563 |
|---|
| Symbol | |
|---|
| ID | 4449939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2838043 |
|---|
| End bp | 2839557 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639694629 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_836206 |
|---|
| Protein GI | 116690583 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATCA AACCGTTCCG CTCGATCGAA TCGGCGGCCA CCGCGACGCA CAACTGGCGG
CGCCGTCAGA TCCTGCGCGC GGGGGCGTCG ACGCTGGTGC TCGGTCTCGT CGCGCCGCGG
CTCGCGCACG CGTCGTCGGT GCTCGGCGTG CGCGTGTGGC CCGCACGCGA TTACACGCGC
GTCACGATCG AATCCGACCA GCCGCTGCAG AATAGCCAAC AGCTGCTGCA GGGTCCCGAC
CGTCTCGTCG TCGACCTGAG CGGCCTCGAC CTCGACCAGG CGCTGCGCGA CCTCGTCTCG
AAGATCGCGC CGAACGATCC GCAGATCCAG TCGGTGCGCG TCGGCCAGTA TCAGCCACAC
GTCGTGCGGA TGGTGTTCGA CCTGAAAGGC TCGGTGAAGC CGCAGGTGTT CACGCTGCCG
CCCGTCGGCA CGTACAAGTA CCGGCTGGTG TTCGACCTGT ATCCGGCCGT CGCGCCCGAT
CCGCTGTCCG ACCTGATCGC GCAGACGGAA CGCAAGGAAC AGGCGCTCAA CGACACCGCG
CGCGCGCAGC AGATGCAGCC GCCGTCCACG CTGGCGGGCC CCGGCACCCC GCCGCCCGGC
GCGGGCGACA ACAGCGACGC ATTCTTCCAG CGTTTCGCGC AGAACACGCC GGCCACGCCG
CACGCGCCGC CGGCCGCCGG CACGCCGTCG ACGCCCGCGA AGCCGGCCGT CAAGCCGCCG
CCCGTCATCG CGCGCCGCGA CGACAGCGAC GACGACGGCG ACACCTACAA GTTCACCGCG
CCGAAATCCG GCAAGGGCGG CACCGTGCGT CTGCTGACGG TCGCGATCGA CCCGGGCCAC
GGCGGCGAGG ATCCGGGCGC GATCGGCGGC AACGGCACGT ACGAGAAGCA CATCGCGCTC
GACATCGCGA AGAAGCTGCG CGCGAAGATC GACGCCGCGC CGAACATGCG CGCGATGATG
ACGCGCGACG CCGACTTCTT CGTGCCGCTG AACGTGCGCG TGCAGAAGGC GCGCCGCGTC
GGCGCGGATC TCTTCGTGTC GATCCACGCG GATGCGTTCA CGACGCCGTC CGCACGCGGC
TCGTCGGTGT TCGCGCTGTC CGACCACGGC GCGACGAGCG CCGCGGCGCG CTGGATGGCG
AACAAGGAGA ATTCGTCGGA CCTGATCGGC GGCATCAACA TCAAGACGGC GGACGCGGCC
GTGAACCGCG CGCTGTTCGA CATGTCGACG ACCGCGCAGA TCCGCGACTC GCTGCGCTAC
GGCAACTACG TGCTGAAGGA AGTCGGCGGC ATCAACAAGC TGCACAAGGG CTCGGTCGAG
CAGGCCGGGT TCGCGGTGCT GAAGGCGCCC GACATTCCGT CGATCCTCGT CGAGACCGCG
TTCATCAGCA ACCCGGACGA AGAGCGCCGG CTCAACGACG ACAGCTATCG CGACGAGATG
GCCGACGCGA TCTTCCGCGG CATCAAGCGC TATTTCGCCG CGAATCCGCC GCTCGCGAAG
AGCCGGATGG CCTGA
|
|---|
| Protein sequence | MLIKPFRSIE SAATATHNWR RRQILRAGAS TLVLGLVAPR LAHASSVLGV RVWPARDYTR
VTIESDQPLQ NSQQLLQGPD RLVVDLSGLD LDQALRDLVS KIAPNDPQIQ SVRVGQYQPH
VVRMVFDLKG SVKPQVFTLP PVGTYKYRLV FDLYPAVAPD PLSDLIAQTE RKEQALNDTA
RAQQMQPPST LAGPGTPPPG AGDNSDAFFQ RFAQNTPATP HAPPAAGTPS TPAKPAVKPP
PVIARRDDSD DDGDTYKFTA PKSGKGGTVR LLTVAIDPGH GGEDPGAIGG NGTYEKHIAL
DIAKKLRAKI DAAPNMRAMM TRDADFFVPL NVRVQKARRV GADLFVSIHA DAFTTPSARG
SSVFALSDHG ATSAAARWMA NKENSSDLIG GINIKTADAA VNRALFDMST TAQIRDSLRY
GNYVLKEVGG INKLHKGSVE QAGFAVLKAP DIPSILVETA FISNPDEERR LNDDSYRDEM
ADAIFRGIKR YFAANPPLAK SRMA
|
|---|
| |