Gene Bcen2424_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2547 
Symbol 
ID4450898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2823204 
End bp2823995 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID639694613 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_836190 
Protein GI116690567 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCACC CGCCCCCCTT CATCGCCGTC ATTCCCGCCC GGCTCGCGTC GACGCGGCTC 
CCGAACAAGC CGCTCGCCGA TCTCGGCGGC AAGCCGATGG TCGTGCGTGT CGCCGAGCGC
GCGCGCGAAG CGGGCGCGCA ACAGGTGCTC GTCGCGTCCG ACGCGCAGAG CGTGCTCGAC
GCGGCGCGCG ATCACGGCTT CGAAGCGGTG CTCACGCGCG CCGACCATCC GTCCGGCACC
GACCGGCTCG CGGAAGTCGC GGCGGCCTTC GGCTGGCGCG ACGACACCGT CGTCGTCAAC
GTGCAGGGCG ACGAGCCGCT GATCGACCCC GTGCTCGTGC GCGACGTAGC GTCGCACCTG
GCCGCGCATC CGGCGTGCGC GATCGCGACC GCCGCTCACC CGATCCACGA CGCGGCCGAC
GTGTTCAATC CGAACGTCGT GAAGGTCGCG CTCGACGCGC AGAGCGTCGC GCTGTACTTC
TCGCGCGCGC CGATTCCGTG GAGCCGCGAC GCGTACCAGC CGCACTGGCC CGACGTCGCG
GCCATGCCTG CACCGGCTTT CCCGGTCTAT CGGCACATCG GCCTCTATGC GTATCGCGCG
CGTTTCCTGC GCACCTATCC GTCGCTCGCG CAGGCGCCAA TCGAACAGGC CGAGCAGCTC
GAACAGTTGC GCGCGCTGTG GCACGGCGAG CGCATCGCGG TGCTGATCAC CGAATCCGCG
CCCGAAGCCG GCATCGATAC GCCGGCCGAT CTCGCGCGCG TGCAGGCCCT TTTTCAGCCG
GGTTCAAAAT AA
 
Protein sequence
MTHPPPFIAV IPARLASTRL PNKPLADLGG KPMVVRVAER AREAGAQQVL VASDAQSVLD 
AARDHGFEAV LTRADHPSGT DRLAEVAAAF GWRDDTVVVN VQGDEPLIDP VLVRDVASHL
AAHPACAIAT AAHPIHDAAD VFNPNVVKVA LDAQSVALYF SRAPIPWSRD AYQPHWPDVA
AMPAPAFPVY RHIGLYAYRA RFLRTYPSLA QAPIEQAEQL EQLRALWHGE RIAVLITESA
PEAGIDTPAD LARVQALFQP GSK