Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2525 |
Symbol | |
ID | 4449901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 2799654 |
End bp | 2800232 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639694591 |
Product | pseudouridine synthase, Rsu |
Protein accession | YP_836168 |
Protein GI | 116690545 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGA TCGCCCTCAA CAAGCCGTTC GGCACGATTT GCCAGTTTTC CGCGCACGAG ACGCGGCCGT CGCTCGGCGA CTGGGTCAAA ACGCCCGGTG TCTATGCGGC CGGCCGGCTC GACGCGGACA GCGAGGGGCT GCTGCTGCTC ACCGACGACG GCGGGCTGCA GGCCCGCATC GCGGAGCCGC GCCACAAGCT GGTGAAGCGC TACTGGGCGC AGGTCGACGG CGCGCCGGGG CCGGCCGACC TGAAGGCGCT CGCCCGCGGC GTCGACCTCG GCGACTACGT GACGCGCCCG TGCCGCGCCG AATTCATCGA GCCGCCCGAC ACGCTGTGGC CGCGCAATCC GCCGATCCGC TACCGCGCCG CGATCCCGAC CACGTGGATC GAGCTCGCGA TCACCGAGGG CAAGAACCGG CAGGTGCGCC GGATGACGGC GGCCGTCGGC TTCCCCACGT TGCGCCTGGT GCGCGTCGGC ATCGGCGCGC TGGACATATT CGCGCTCGGC ATTGCACCGG GCGAAACGAT CGCGCTGCCG CCGCGCGCGC CGTGGGACGG TTTCGCGCCC GTCGGATGA
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Protein sequence | MNLIALNKPF GTICQFSAHE TRPSLGDWVK TPGVYAAGRL DADSEGLLLL TDDGGLQARI AEPRHKLVKR YWAQVDGAPG PADLKALARG VDLGDYVTRP CRAEFIEPPD TLWPRNPPIR YRAAIPTTWI ELAITEGKNR QVRRMTAAVG FPTLRLVRVG IGALDIFALG IAPGETIALP PRAPWDGFAP VG
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