| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2524 |
|---|
| Symbol | |
|---|
| ID | 4449900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2798119 |
|---|
| End bp | 2799375 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639694590 |
|---|
| Product | isocitrate dehydrogenase |
|---|
| Protein accession | YP_836167 |
|---|
| Protein GI | 116690544 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0538] Isocitrate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.140161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTATC AGCACATCAA GGTTCCGGAG GGCGGTGACA AGATCACCGT CAACAAGGAC
TTCTCGCTCA ACGTTTCCGA TCAGCCGATC ATTCCCTATA TCGAAGGCGA CGGTACGGGC
TTCGATATCA CGCCGGTCAT GATCAAGGTC GTCGATGCGG CGGTCGCGCA TGCGTACAAG
GGCAAGCGCA AGATCCACTG GATGGAGATC TTCGCGGGCG AGAAGGCGAC CAAGGTGTAC
GGTCCGGACG TGTGGCTGCC GGACGAAACG CTGCAGGTCC TGAAGGAATA CGTGGTGTCG
ATCAAGGGGC CGCTCACGAC CCCGGTCGGC GGCGGCATCC GTTCGCTGAA CGTCGCGCTG
CGCCAGGAGC TCGATCTGTA CGTGTGCCTG CGCCCGGTCC AGTACTTCAA GGGCGTGCCG
TCGCCGGTGC GTGAGCCGCA GAAGATCGAC ATGGTGATCT TCCGCGAGAA CTCGGAAGAC
ATCTACGCGG GCATCGAATG GGCCGCGGGC TCCGAGCAGG CGAAGAAGGT GATCAAGTTC
CTGCAGGACG AGATGGGCGT GAAGAAAATC CGCTTCCCGG AAACTTCCGG GATCGGCGTC
AAGCCCGTGT CGACCGAAGG CACCGAGCGT CTCGTGCGCA AGGCGATCCA GTACGCGATC
GACAACGATC GCAAGTCGGT CACGCTGGTG CACAAGGGCA ACATCATGAA GTTCACGGAA
GGCCTGTTCC GTGACGCCGG CTACGCGCTC GCGCAGAAGG AATTCGGCGG CGAGTTGATC
GACGGCGGCC CGTGGATGCG CGTGAAGAAC CCGAAGACGG GCAACGAGAT CGTGATCAAG
GATTCGATCG CCGATGCCTT CCTGCAGCAG ATCCTGCTGC GCCCGGCCGA ATACGACGTG
ATCGCGACGC TGAACCTGAA CGGCGACTAC ATCTCCGACG CGCTGGCCGC GCAGGTCGGC
GGCATCGGGA TCGCGCCTGG CGCGAACCTG TCGGATTCGG TCGCGATGTT CGAGGCGACG
CACGGCACGG CGCCGAAGTA CGCGGGCAAG GATTACGTGA ACCCCGGTTC CGAGATCCTG
TCGGCGGAAA TGATGCTGCG CCACCTCGGC TGGACGGAAG CAGCCGACAC GATCATCGCC
GCGATGGAGA AGTCGATTCT GCAGAAGCGC GTCACGTACG ACTTCGCGCG CCTGATGGAA
GGCGCGACGC AGGTGTCGTG CTCCGGCTTC GGCGAAGTGC TGATCGAGAA CATGTAA
|
|---|
| Protein sequence | MPYQHIKVPE GGDKITVNKD FSLNVSDQPI IPYIEGDGTG FDITPVMIKV VDAAVAHAYK
GKRKIHWMEI FAGEKATKVY GPDVWLPDET LQVLKEYVVS IKGPLTTPVG GGIRSLNVAL
RQELDLYVCL RPVQYFKGVP SPVREPQKID MVIFRENSED IYAGIEWAAG SEQAKKVIKF
LQDEMGVKKI RFPETSGIGV KPVSTEGTER LVRKAIQYAI DNDRKSVTLV HKGNIMKFTE
GLFRDAGYAL AQKEFGGELI DGGPWMRVKN PKTGNEIVIK DSIADAFLQQ ILLRPAEYDV
IATLNLNGDY ISDALAAQVG GIGIAPGANL SDSVAMFEAT HGTAPKYAGK DYVNPGSEIL
SAEMMLRHLG WTEAADTIIA AMEKSILQKR VTYDFARLME GATQVSCSGF GEVLIENM
|
|---|
| |