| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2523 |
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| Symbol | |
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| ID | 4449899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 2795610 |
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| End bp | 2797838 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639694589 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_836166 |
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| Protein GI | 116690543 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0065836 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACTT CGCCCAAGAT CATCTACACC CTCACCGACG AAGCGCCGGC GCTCGCGACC
TACTCGCTGC TGCCGATCGT CAAGGCCTTC ACGCGTTCGT CCGGCGTCGC CGTCGAAACG
CGCGACATCT CGCTCGCCGG CCGCATCATC GCGGCATTCG CAGACGTCCT GCCGTCGGAG
CAGAAGGGTT CCGACGATCT GGCCGAGCTG GGCCAGCTCA CGCTGAAGCC GGAAGCGAAC
ATCATCAAGC TGCCGAACAT CAGCGCATCG GTGCCGCAGC TGAAGGCCGC GATCGCCGAA
CTGCAGGCGC AGGGCTACGC GCTGCCGGCC TATCCGGAAG ATCCGTCGAC GGACGAAGAA
AAGGCCGTCA AGGCGCGTTA CGACAAGATC AAGGGCAGCG CGGTGAACCC GGTGCTGCGC
GAAGGCAACT CCGACCGCCG CGCGCCGCTG TCGGTCAAGA ACTACGCACG CAAGCATCCG
CACAAGATGG GCGCGTGGAA GGCCACGTCG AAGGCGCACG TCGCGCACAT GACCGAAGGT
GACTTCTACG GCAGCGAGAA GTCGGCGCTG ATCGCCGATG CCGGCAGCGT GAAGATCGAA
CTCACGACGA CCGACGGCGC GAAGAAGGTG CTGAAGGAAA AGACGGCCGT GAAGGCCGGT
GAAGTGATCG ACGCATCGGT GATGAGCCGC AATGCGCTGC GCAGCTTCAT CGAAGCGCAG
ATCGCCGACG CGAAGGCGCA GGACGTGCTG TTCTCGGTGC ACCTGAAGGC GACCATGATG
AAGGTCTCGG ACCCGATCCT GTTCGGTCAC TTCGTGTCGG TGTTCTACCG CGACGCGCTC
GCGAAGCACG CGGACGTGCT GGCGAAGGCC GGCTTCAACC CGAACAACGG GATCGGCGAC
CTGTACGCGC GCCTGAAGGA CCTGCCGGCC GACACGCGCG AAGCGATCGA AGCCGACGTC
AAGGCCGAGT ACGCGGTGCG TCCGCGCCTC GCGATGGTCA ACTCGGACAA GGGCATCACG
AACCTGCACG TGCCGAGCGA CGTGATCGTC GACGCATCGA TGCCGGCGAT GATCCGCGAT
TCGGGCGGCA TGTGGGGCCC GGACGGTCAG CTGTACGACG CGAAGGCCGT GATTCCGGAC
CGCTGCTACG CGGGCGTCTA CCAGGCCGTG ATCGAGGACT GCAAGCAGCA CGGCGCGTTC
GATCCGGTCA CGATGGGCAG CGTGCCGAAC GTCGGCCTGA TGGCGCAGGC GGCCGAGGAA
TACGGTTCGC ACGACAAGAC GTTCCAGATC CCGGCGGACG GCGTCGTGCG CGTCATCGAC
GAAGCCGGCA ACGTGCTGCT CGAGCACGCG GTCGAGTCGG GCGACATCTG GCGCATGTGC
CAGACGAAGG ACGCACCGGT GCAGGACTGG GTCAAGCTCG CGGTCAACCG TGCCCGCGCG
ACCGGCGCTC CGGCCGTGTT CTGGCTCGAT CCGGCGCGCG CGCACGATGC GCAGATCATC
GCGAAGGTCG AACGCTACCT GAAGGATCAC GACACGAACG GCCTCGACAT CCGGATCATG
ACGCCGGTCG ACGCCACGCG TTTCTCGCTC GAGCGCATCC GCGCGGGCAA GGACACGATT
TCGGTCACCG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTC
GGCACCAGCG CGAAGATGCT GTCGATCGTG CCGCTGATGG CCGGCGGCGG GATGTTCGAA
ACGGGTGCGG GCGGTTCCGC GCCGAAGCAC GTGCAGCAGT TCGTCGAGGA AGGCTTCCTG
CGCTGGGATT CGCTCGGCGA ATTCCTCGCG CTGGCCGCGT CGCTCGAACA CCTCGGCAAC
GCTTATCAAA ACCCGAAGGC GCTCGTGCTC GCGAAGACGC TCGACCAGGC GACCGGCAAG
TTCCTGGACG AGAACAAGTC GCCGGCGCGC AAGGTGGGTG GTCTCGACAA CCGCGGCAGC
CACTTCTACC TGTGCCTGTA CTGGGCGCAG GCGCTGGCCG AGCAGACCGA GGACGCCGCG
CTGAAGGCGC AGTTCGAAGG CGTGGCGAAG ACGCTGTCCG ACAACGAAGC GCGCATCCTG
GAAGAACTGG CGGCCGCGCA AGGCAAGCCG CAGGCGATCG GCGGCTACTA CCGTCCGAAC
GTCGAGCTGA CGAGCCAGGC CATGCGCCCG AGCGCGACGC TGAACGGCAT CGTCGACGCG
CTCGCCTGA
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| Protein sequence | MSTSPKIIYT LTDEAPALAT YSLLPIVKAF TRSSGVAVET RDISLAGRII AAFADVLPSE
QKGSDDLAEL GQLTLKPEAN IIKLPNISAS VPQLKAAIAE LQAQGYALPA YPEDPSTDEE
KAVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWKATS KAHVAHMTEG
DFYGSEKSAL IADAGSVKIE LTTTDGAKKV LKEKTAVKAG EVIDASVMSR NALRSFIEAQ
IADAKAQDVL FSVHLKATMM KVSDPILFGH FVSVFYRDAL AKHADVLAKA GFNPNNGIGD
LYARLKDLPA DTREAIEADV KAEYAVRPRL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD
SGGMWGPDGQ LYDAKAVIPD RCYAGVYQAV IEDCKQHGAF DPVTMGSVPN VGLMAQAAEE
YGSHDKTFQI PADGVVRVID EAGNVLLEHA VESGDIWRMC QTKDAPVQDW VKLAVNRARA
TGAPAVFWLD PARAHDAQII AKVERYLKDH DTNGLDIRIM TPVDATRFSL ERIRAGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQFVEEGFL
RWDSLGEFLA LAASLEHLGN AYQNPKALVL AKTLDQATGK FLDENKSPAR KVGGLDNRGS
HFYLCLYWAQ ALAEQTEDAA LKAQFEGVAK TLSDNEARIL EELAAAQGKP QAIGGYYRPN
VELTSQAMRP SATLNGIVDA LA
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