| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2478 |
|---|
| Symbol | |
|---|
| ID | 4449115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2750171 |
|---|
| End bp | 2751073 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639694544 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_836121 |
|---|
| Protein GI | 116690498 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0310179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTCG ACAGCAGGCT GCTCAGCGGT ATCGGTGTGC TCTCCGCGGT GATAGAGGCC
GGCACCTTCG CGCGGGCGGG CGAGGCGATG GGGCTGACTC AACCGGCGGT GAGCCGCGCC
GTTGCCCGGC TGGAAGAGCG GGTCGGCATC CGGATCTTCA ACCGGACGGC CCGCGCGATC
ACGTTGACCG ACGAAGGGCG ACGCTTTTAC GAGGCGGTCG CGCCGCTGCT GGCCGGCATC
GAGGAGGCGG CGCTCGACGC CGGCCAGTCG AAGGCGCGCG TGAGGGGGCG GCTGCGGGTC
AACGTGGACG GCACGTTCGG CCACTACGTG CTGGCGCCGC GGATGGCGGA ATTTCTCGAC
CGCTTTCCCG ATCTGTCGGT CGAGATCAGC GTGCGGGACC GGATGGGCGA CCTCGTCGCC
GACGGTTTCG ACGTGGCCGT GCGCTTCGGT ATCCCGGAGC CGTCGTCATA TCGGGCGCGA
CTGCTGCTCG AGACGCGTGT GCTGACCTGC GCATCGGCGG CCTACGTCGC GCGTCATGGC
GAACCGCGTC ATCCGCGCGA TCTCGCGGAC GGGCATCGTT GCGTGCTGAT CCGCGATCCG
GTGACGGGGC GACCGTACGA ATGGGAGTTT CATCGCGGCA AGGAAGTGGT GCCGGTCGAC
GTCGCCGGCA GGTTGACCGT CAACGATACG GGCGGGCTGC TCGGCGCTTG CCTGGGCGGT
GTCGGCATCG CGCAACTGCT GGAGCTCTAT GCGCGGGAGA TCCTCGCCGA CGGGCGGTTG
GCGCAGTTGT TGCCCGAGTG GGCCGACGAG ACTTTTCCGC TTTATGCGTA TCACCACGCG
TCGAATCTCG TTTCGGCCAA GGTTAGGGTG TTTCTCGACT TCGTCCGCGA GTTGATGGCC
TGA
|
|---|
| Protein sequence | MGFDSRLLSG IGVLSAVIEA GTFARAGEAM GLTQPAVSRA VARLEERVGI RIFNRTARAI
TLTDEGRRFY EAVAPLLAGI EEAALDAGQS KARVRGRLRV NVDGTFGHYV LAPRMAEFLD
RFPDLSVEIS VRDRMGDLVA DGFDVAVRFG IPEPSSYRAR LLLETRVLTC ASAAYVARHG
EPRHPRDLAD GHRCVLIRDP VTGRPYEWEF HRGKEVVPVD VAGRLTVNDT GGLLGACLGG
VGIAQLLELY AREILADGRL AQLLPEWADE TFPLYAYHHA SNLVSAKVRV FLDFVRELMA
|
|---|
| |