| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2477 |
|---|
| Symbol | |
|---|
| ID | 4449113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2748448 |
|---|
| End bp | 2749632 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639694542 |
|---|
| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_836120 |
|---|
| Protein GI | 116690497 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.212643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTC CCGCCCTGTT GCGACGTCCC ACCCTGTTGC GCCGCACCCG CCGCGCCGCC
GGCGCCGCCC TCGTGCTGGC CTGCGCGGCC GCGCATGCCG ACCTGAAGGT CGGCGTCGAC
CTGTCGTCGA CCGGCCCGGC CGCCGCGATC GGCATCACGA GCAAGAACGC GATCCTGATG
TGGCCGAAGA CGATCGCCGG GCAACCCGTG CAGGTCACGG TGCTCGACGA CGCGTCCGAC
CCGGGCGCGG CGGTACGCAA CATCCGCAAG CTGGTCGACG AGGATCACGT CGACGTCGTG
GTCGGCCCGA ACATCACGCC GGCCGCGCTC GCGGCGCTCG ACGCAGTGGC GGCCGCGCAG
ACGCCGATGA TCACGCTGGT CGGCTCGGGC TCGATCGTCG AGCCGCAGGA GGGCGCGCGG
ACCTGGGCAT TCAAGATGGC GCAGAGCGAC CGCGCGATGG CCGACGTGAT GACCCGCTAC
ATGGCCAACC ACGGCGTGAA GACGGTCGGC TTCATCGGCT TCGCGGACAG CTACGGCGAC
AGCTGGCTCA ACGAATTCAC GCGCTTCGCG GACCTGCGCA AGATCCGCGT GATCGCGACC
GAGCGCTTCA ACCGCACCGA CGCGAGCGTC ACCGGCCAGG CGCTGAAACT GATCGCGGCG
AAGCCGGACG CGATCCTGAT CGCGGGCGCC GGTACGCCGA CCGTGCTGCC GCAGCGCACG
CTGATCGAGC GCGGCTACAA GGGCCCGATC TACCAGACGC ACGGGATCGC GACGCCGGAA
TTCATCAAGC TCGGCGGCAA GGACGTGGAC GGGACGCTGT TTCCGACCCA GCCGGTGGTC
GTCGCCCGCA CGCTGCCGGC CGACCACCCG GCCCGCCAGG CCGCGCTCGC GTTCGTCGAC
GCGTACGAGG CGAAATACGG CGCCGGCACG GTCACGCAGT TCGCGGGCGA TGCGGCGGGC
GTGTACCCGC GCCTCGCCGA TGCGGTCGGC CGCGCGCTGA AAGCGGCGCA ACCCGGCACG
CCCGCGTTCC GCGCGGCGCT GCGCCGCGAG CTCGAACGCG CGCACGAGCT CGTCGTGCCG
AACGGCGTCG TCAATACCAG CGACAAGGAT CACGTGGGGC TCGACCAGCG CGCGAGCGTG
ATGGGGATCG TGAAGCAGGG CCGGTTCGTG TACCTGAGCC AGTAG
|
|---|
| Protein sequence | MTLPALLRRP TLLRRTRRAA GAALVLACAA AHADLKVGVD LSSTGPAAAI GITSKNAILM
WPKTIAGQPV QVTVLDDASD PGAAVRNIRK LVDEDHVDVV VGPNITPAAL AALDAVAAAQ
TPMITLVGSG SIVEPQEGAR TWAFKMAQSD RAMADVMTRY MANHGVKTVG FIGFADSYGD
SWLNEFTRFA DLRKIRVIAT ERFNRTDASV TGQALKLIAA KPDAILIAGA GTPTVLPQRT
LIERGYKGPI YQTHGIATPE FIKLGGKDVD GTLFPTQPVV VARTLPADHP ARQAALAFVD
AYEAKYGAGT VTQFAGDAAG VYPRLADAVG RALKAAQPGT PAFRAALRRE LERAHELVVP
NGVVNTSDKD HVGLDQRASV MGIVKQGRFV YLSQ
|
|---|
| |