| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2455 |
|---|
| Symbol | |
|---|
| ID | 4449091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2727046 |
|---|
| End bp | 2728161 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639694520 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_836098 |
|---|
| Protein GI | 116690475 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCACG GAACGTTCTT CGATGCCGAC CCCAATCGTC CGCCACGCGC CCCTGTCGCG
CCCGGCCGGC TGCCGCAAGC GGATGCGCCG CGCGTCGTGC GCGCGGCCGT GCGCGGCATG
AGCGCCGCAC GCGCCACCGT CATCTGGGCC GCGCTGGCCG CGTTGGTCGC GCTGCTGTTC
GTCGCGTCGC TGTCGATCGG CAGCGTGCCG ATGTCGCCGT GGCAGGCGCT CGCATCCCTC
GTGCCGCACG GCGGCGACAC CCTGTTTGCC GACATCGTCC GGACGCTGCG CCTGCCGCGC
GCGCTCGCGG GTTTCGCGTG CGGCGCGCTG CTCGCGCTGG CCGGCGCGTT GTTGCAGGTG
CTGCTGCGCA ATCCGCTCGC CGAGCCGTAC GTGCTGGGTG TGTCCGGCGG CGCGGCCGGC
TTCGCGCTCG TCGCGATGAT CGCGGGCGGC GCATGGTGGC TCGTCGACGC ATCCGCGTTC
GCCGGTTCGC TCGTATCGGT CGCGCTGGTG CTCGGTCTCG CGCGGCGCGA GCTGTGGCGG
GGCGACTCGC GCGACGCGTC GCCGCGGCTG CTGCTCACCG GCGTCGTGAT CGCGGCGGGG
TGGGGCGCGC TCGTCACGCT GTTGCTGTCG CTCGCGCCCG ACGCGCGGCT GCGCGGCGTC
ATCTTCTGGC TGACGGGCGA CCTGAACGGC GCGACGGCGC CATGGTTCGC GTGGGGCGCG
CTGCTGCTGA GCGCAGGCGT CGCGCTGCCG GTCGCGCCGC AACTGAACGT GCTGCTGCGC
GGCGACGCGA CCGCGCAGGC GCTCGGCGTG CCGGTCGCGC GCCTGCGCGT GCGGATCTAT
CTCGTCGCGT CGCTGGCCGC CGCGGCTGCC GTGACGACGG CCGGGACGAT CGGCTTCGTC
GGCCTCGTCG TGCCGCATGC GTTGCGGCTC GCATTCGGCA ACGACCAGCG GATGCTGCTG
CCGGCCGCGA TGCTCGCGGG CGGGGGCGGC GTGATGGCGG CCGACCTGCT CGCGCGTACC
GCGATCGCGC CCGCGCAATT GCCGGTCGGC GTGATGACCG CGTTGATCGG CGTGCCGGTG
TTCCTGTGGA TGTTGCTGAG GAGGCCGATG CGATGA
|
|---|
| Protein sequence | MFHGTFFDAD PNRPPRAPVA PGRLPQADAP RVVRAAVRGM SAARATVIWA ALAALVALLF
VASLSIGSVP MSPWQALASL VPHGGDTLFA DIVRTLRLPR ALAGFACGAL LALAGALLQV
LLRNPLAEPY VLGVSGGAAG FALVAMIAGG AWWLVDASAF AGSLVSVALV LGLARRELWR
GDSRDASPRL LLTGVVIAAG WGALVTLLLS LAPDARLRGV IFWLTGDLNG ATAPWFAWGA
LLLSAGVALP VAPQLNVLLR GDATAQALGV PVARLRVRIY LVASLAAAAA VTTAGTIGFV
GLVVPHALRL AFGNDQRMLL PAAMLAGGGG VMAADLLART AIAPAQLPVG VMTALIGVPV
FLWMLLRRPM R
|
|---|
| |