| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2425 |
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| Symbol | hemC |
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| ID | 4448321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 2690405 |
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| End bp | 2691616 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639694490 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_836068 |
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| Protein GI | 116690445 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.495254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTCC TTGGGAAAGC TCGAGTCAAA AGGAACTGCG GAAACTGCGG GAACTGCGGT
CAAGCAACCA GCTACGTGCG GCACATCCGC ACAACGGCGC CGCGACCCGC GCGGAAGCAG
GCCGGGCGCA GGCTCCGGGC CCGGGCGGGC CGGGGCGTGC GTGCTACCAT TGTTCGATCT
TCAATCCCGT CCTTCGATGT TCCAGCAATG AATTCCGAGA CCCCCGCGGC CGGGCCGCAG
CAGGCACAGC CGCCCGCGAC GTTGACGATT GCTTCGCGCG AGAGCCGCCT GGCGATGTGG
CAAGCCGAAC ATGTGCGTGA TGCGCTGCGC AAATTATATC CAGCTTGTGA CGTGAAAATC
CTCGGGATGA CGACGCGCGG CGATCAGATT CTCGATCGCA CGCTGTCGAA GGTCGGCGGC
AAGGGCCTGT TCGTGAAGGA ACTGGAAGCC GCGCTGGCCG ACGGCCGCGC CGATCTCGCC
GTGCATTCGC TGAAGGACGT GCCGATGGCG CTGCCCGACG GCTTCTCGCT CGCCGCGATC
ATGGAACGCG AAGACCCGCG CGATGCCTTC GTGTCGAACG ACTACGCGTC GCTCGACGCG
CTGCCGGCCG GCGCGGTCGT CGGCACATCG AGCCTGCGTC GCGAGGCGAT GCTGCGGTCG
CGTTATCCGC ATCTCGAGGT CCTGCCGCTG CGCGGCAACC TCGACACGCG GCTCGCGAAG
CTCGACCGCG GCGACTACGC GGCGATCATC CTCGCGGCCG CCGGCCTGAA ACGCCTCGGC
CTCGAAGCGC GGATTCGTGC GCTGCTCGAC GTCGAGGCCA GCCCGCCCGC GGCGGGCCAG
GGCGCGCTCG GCATCGAGAT CGCCGCGCAC CGCGACGACG TCGCCGCGTG GCTCGCGCCG
CTGCACGACC CGCAGACCGC GCTCGCGGTC GAGGCCGAGC GGATGGTGTC GCGCGCGCTC
GGCGGCAGTT GCGAGGTGCC GCTCGCCGCG CACGCGGTGT GGCGCGCGGG CGAGCTGTAC
CTGACGGGAC GCGTGTCGAC CACCGACGGC AAGCGCGTGC TGACGGCCGA GGAATGCGGC
GCGGTCGTGA CCGTCGCCGA TGCGCTCGCG CTCGGCCGCG CGGTGTCCGA CGAACTCGAG
GCGCAAGGCG CGCTCGACAT CGTCCAGGCG CTGCTCGCGA GCTCGCAGGC CGCGGGCAAG
GGCGACGCCT GA
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| Protein sequence | MGFLGKARVK RNCGNCGNCG QATSYVRHIR TTAPRPARKQ AGRRLRARAG RGVRATIVRS
SIPSFDVPAM NSETPAAGPQ QAQPPATLTI ASRESRLAMW QAEHVRDALR KLYPACDVKI
LGMTTRGDQI LDRTLSKVGG KGLFVKELEA ALADGRADLA VHSLKDVPMA LPDGFSLAAI
MEREDPRDAF VSNDYASLDA LPAGAVVGTS SLRREAMLRS RYPHLEVLPL RGNLDTRLAK
LDRGDYAAII LAAAGLKRLG LEARIRALLD VEASPPAAGQ GALGIEIAAH RDDVAAWLAP
LHDPQTALAV EAERMVSRAL GGSCEVPLAA HAVWRAGELY LTGRVSTTDG KRVLTAEECG
AVVTVADALA LGRAVSDELE AQGALDIVQA LLASSQAAGK GDA
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