| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2410 |
|---|
| Symbol | |
|---|
| ID | 4448161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2671356 |
|---|
| End bp | 2672435 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639694475 |
|---|
| Product | outer membrane protein (porin)-like protein |
|---|
| Protein accession | YP_836053 |
|---|
| Protein GI | 116690430 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.08631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGA AAGCTTTGGT CGCGGCCGCG CTGATGGCTG CTGGGGTGGT GACGGCGCAC
GCGCAGAGCA GCGTCACGCT GTATGGCCGC CTGGATGCAG GCATCGAGTA CATGAACGGC
CTGCAAAACG GCCACCAAGT GCGCGCGGAA AGCGGCGACT GGGGCACGAG CCTGTGGGGC
TTGAAGGGTA GCGAGGACAT CGGCGGCGGC AACAAGATCC TGTTCCACCT CGAAGGCGCG
TTCAACACGA TGACGGGCGG CTTCAGCGGT TCGATCTGGG ATCGTTTCGC GACCGTCGGT
ATCTCGAACG ACCGCTACGG TACGCTGCTG TTGGGTCGCG AACTCGCGAT CGCCAACGGC
GTGTGGGACT TCGACCCGTT CGGTCAGTCG TCCTGGTCGA CGGCCTCGCT GGTGCGCGGC
CGCAACTGGA ACAAGACCAG CAACAACGTG TCGTACCAGT CGCCGTCGCT CTACGGCCTC
GACTTCTACG GCCAGTTCTC GTTCTCGAAC TCGACCAGCT TCAACGGCAA CACGACGGCC
GGCCAACCGG GCCGTGCAAT GGGCGGTCAG GTCACCTACA CGAACTCGCT GTTCCAGTTG
CGCGGCATCT ACGACGAAAC GCGCGACAGC AACGGCCGCT TCTCGGACGT GTTCAACTAC
TCGCGTGAAT ACTTCGCGGG CGTGAACGTG TTCCTCGGCC AGTTCAAGGT TCAGGCCGCC
TATCAGGCAT CGCGCGCCGA CGGCAGCGGT GGCCCGGCAG TGAACGCCGG CGTGACGGGT
ACGCAACAGG TGTGGGGCGG CGTGACGTGG CAGGCCACGC CGGCAGCAGC GCTGATCGCG
GCCGTGTATC ACGTGAACGC GAACCACGGT GGCGGCAACG CGAACATCTA CACGGTCGGC
GGCTCGTACA ACATCTCGAA GCGCACGCTG TTCGACCTGC AGGTCGCGAC GGTGCGCAAC
AGCTCGTCGG CCAACTTCGG CCTGAACGCG AACGGCGCCG GTACGGCCGT ATCGACGGGC
AACCCGCATC AGGGCGGCAG CCAGACCGGC GTCTACGCCG GCATCCAGCA CCTGTTCTGA
|
|---|
| Protein sequence | MMKKALVAAA LMAAGVVTAH AQSSVTLYGR LDAGIEYMNG LQNGHQVRAE SGDWGTSLWG
LKGSEDIGGG NKILFHLEGA FNTMTGGFSG SIWDRFATVG ISNDRYGTLL LGRELAIANG
VWDFDPFGQS SWSTASLVRG RNWNKTSNNV SYQSPSLYGL DFYGQFSFSN STSFNGNTTA
GQPGRAMGGQ VTYTNSLFQL RGIYDETRDS NGRFSDVFNY SREYFAGVNV FLGQFKVQAA
YQASRADGSG GPAVNAGVTG TQQVWGGVTW QATPAAALIA AVYHVNANHG GGNANIYTVG
GSYNISKRTL FDLQVATVRN SSSANFGLNA NGAGTAVSTG NPHQGGSQTG VYAGIQHLF
|
|---|
| |