| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2405 |
|---|
| Symbol | |
|---|
| ID | 4448156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2666982 |
|---|
| End bp | 2667671 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639694470 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_836048 |
|---|
| Protein GI | 116690425 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.314005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTAC AAGGCTACGG CCCGCTGATC CTCGCCGGCA CCTGGCAAAC CGTCAAACTG
GCGGTGCTTT CGCTTGCGCT GTCGTTCCTG CTGGGGCTGC TCGGCGCCGG CGCGAAGCTG
TCGCGCAACC GCGTGACGAA CGGCGTCGGC ACCGTCTACA CGACGCTGAT CCGCGGCGTA
CCCGATCTCG TGCTGATGCT GCTGCTGTTC TACAGCCTGC AGATCTGGCT GAACATGGCG
ACCGACGCGC TCGGCTGGGA CCAGATCGAC ATCGACCCGT TCCTCGCCGG CGTGCTCGTG
CTCGGCTTCA TCTACGGCGC GTACTTCACC GAGACGTTCC GCGGCGCGTT CCTGTCGGTG
CCGCGCGGCC AGCTCGAGGC CGGCAGCGCC TACGGGATGA CGAACTGGCA GGTGTTCACG
CGGATCATGT TCCCGCAGAT GATGCGCTTC GCGCTGCCGG GCATCGGCAA CAACTGGCAG
GTGCTCGTGA AGTCGACCGC GCTCGTGTCG ATCATCGGCC TGGCCGACGT CGTGAAGGCG
TCGCAGGACG CCGGCAAGGG CACGCTGCGG TTCTTCTTCT TCACGCTGAT CGCGGGAGCG
GTCTACCTCG CCATCACGAC GATCTCGAAC TTCGTGCTGA TGTGGCTCGA AAAGCGCTAC
TCGACCGGTG TCCGCAAGGC TGACCTATGA
|
|---|
| Protein sequence | MFLQGYGPLI LAGTWQTVKL AVLSLALSFL LGLLGAGAKL SRNRVTNGVG TVYTTLIRGV
PDLVLMLLLF YSLQIWLNMA TDALGWDQID IDPFLAGVLV LGFIYGAYFT ETFRGAFLSV
PRGQLEAGSA YGMTNWQVFT RIMFPQMMRF ALPGIGNNWQ VLVKSTALVS IIGLADVVKA
SQDAGKGTLR FFFFTLIAGA VYLAITTISN FVLMWLEKRY STGVRKADL
|
|---|
| |