Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2354 |
Symbol | |
ID | 4450410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 2615803 |
End bp | 2618175 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639694417 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_835997 |
Protein GI | 116690374 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCACG CGAGCAGGAC GCCGCCCTCT TCGATGAGCT CTGCCCGGTC CAACCACACG CCGCCGAACC GGCCGCTGCG CGCGCCGCGC AAGTCGCGCC GGCGTGCGCT GTTCGCCATC CCGCTGCTCG GGATGCTGGC GCTCGCGCTG CTGTGGGCCG TGATCATCGC GCGTCTGTCC GTCGAAAAGG ACAGTGCGTA CAAGGAAGCG GCGGCCTCCG CGGCGATCCT GTCGTCCGCG CTCGAGCAGC ATACGGTCAA GGCGATCCAC CAAGTCGACC AGATCACCCG CTTCGTCAAG TTCGAATTCG AGAAATCGCC GGCGCGCTTC AATCTCGCGA GCGCCGTCGA GAAAGGCGTC GTGCCGAGCG ACACGCTGAT CCAGGTATCG CTCGTCAACG CGAAGGGCAT CCTGTTCGCG AACACCGCCG AACTCCATCC GCAGCCGATC AACCTGTCCG ACCGCGAGCA CTTCAAGGTC CACCTCGCGC ACAACGACGA CCGCCTCTTC ATCAGCAAGC CCGTGCTCGG CCGCGTGTCG AGCCACTGGA CGCTGCAGAT GACGCGGCGC CTGAACAACC CGGACGGCAG CTTCGCGGGC ATCGTCGTGG TGTCGGAAGA CCCGAGCTAC TTCACGAACG ATTTCTACAA CAACGCGGCC ATCGGCAAGG AAGGCGTGAT CGCGGTCGTG TCCGATACGG GCGCAGTGCT CGCGCGGCGC ACAGGCTCGG TGAGCAACGC GCCGGGCGCG TTTTCGGCGT CGGGCGTCTA CCCGATCGCC GAGCGCGTGA CGGGCACGAT CATCGATCCG ATCGACGGCG TGACGCGCAT CGTGTCGTAC CGCCACCTCG ACGGCTACCC GCTCGCGGTG ATGGTCGGCC TGTCGCAGAC GGAAGAGTTC GCGGACTACA CCCACACGCG CAACGTCTAC CTGCTGATGA CGAGCTTCAT CACGCTCGCG ATGCTCGCGT TTTTCGGCGT CGCGACGGGC CTGATCGGCA AGCTGCTCGG CCGCGAGCGC GAAATGACGC AGCTCGCCGA ATACGACCTG CTCACCGGCC TCGCGAACCG CTATGCGACG CTGCGCGGGC TGCGCAACGA CGTGTCGATG CCCGCGAGCC TGTCGCGGCT CGGCCTGCTG TTCATCGATC TCGACAACTT CAAGACCGTC AACGACACGC TCGGCCACAA CGCCGGCGAC ATCGTGCTGC AGATGACCGC GTCGCGCCTG GCCGATGCGG TCGGCGACGA AGGTTCGCTC GCGCGCATCG GCGGCGACGA GTTCGTCGTC GTGATGAAGG GCGACGACGT CGAGCGGCGC GCGGTGCGGC TCGCGGAAGC GATCATCCGG ATGTTCGGCG AGCCGTTCGA CGTGCGCGGC AGTTCGTTCG TGCTGCATGC GAGCATCGGC ATCGCGCTGC ACACCGTCGC GAACGAAAGC GAGATCGACC TGCTGAAAAA GGCCGACCTC GCGATGTACA GCGCGAAGGA CGCCGGCAAG AACTGCTACC AGTTCTATGC GCCGCACCTG TCGCACCGGG CCGACCATCT GATGCGCTGG GAACAGCAAT TGCGCGTCGC GCTCGCCGAG GGGCAGTTGT TCCTCGCGTA CCAGCCGAAG ATCGACCTCA CGCATCGCAC CATCACCGGC TTCGAGGCGC TCGCACGCTG GGATCACCCC GAGCACGGCG TCATCTCCGC GAACGAATTC ATTTCGATCG CCGAATCGAC CGGCCTGATC GTGCCGATCG GCGACTTCGT GATCCGCACC GCGTGCGAGC AGATCGCGCG CTGGCGCGAC GAAGGCCACG ACACGCTGAC GCTCGCGGTC AACATCTCGC CCGTGCAGTT CTGGCGCGGC GACCTGATCG AGACGATCTC GCAGGCGCTG CAGGACACCG GCATCCCCGC GAACCGGCTC GAGATCGAGA TCACCGAGAC CGCGATGATG GAATATCCGG AACTCGTGTC CGAGAAGATC GTCGCGCTGA AAAAGCTCGG CATCCGGATC GCGCTCGACG ATTTCGGCAC CGGCTATTCA TCGCTGTCGT ACCTGCACCG CTTCTCCGTC GATACGCTGA AGGTCGACCG CTCGTTCGTG CAGGCGATTC CGAACGACCG CAGCGTGTGC GTGATGGTGT CGTCGATCGT GCATCTCGCG CGCTCGCTCG GGCTGACGGT CGTCGTCGAG GGCACCGAGA CCGAGGAGCA GATCACGTGG CTGTCCGCGC TCGGCGAAAT CGAGGCGCAG GGCTTCCTGT TCTCGCGCCC GGTGCCGGCC GATGCGATTC CCGCGCTGAT CGCCCGCTTC GGCGTGCGCG GCGAGCATCC GAATGTCGTC GCGCATCGCG CGACCGGCAG CACGGGCGCC TGA
|
Protein sequence | MAHASRTPPS SMSSARSNHT PPNRPLRAPR KSRRRALFAI PLLGMLALAL LWAVIIARLS VEKDSAYKEA AASAAILSSA LEQHTVKAIH QVDQITRFVK FEFEKSPARF NLASAVEKGV VPSDTLIQVS LVNAKGILFA NTAELHPQPI NLSDREHFKV HLAHNDDRLF ISKPVLGRVS SHWTLQMTRR LNNPDGSFAG IVVVSEDPSY FTNDFYNNAA IGKEGVIAVV SDTGAVLARR TGSVSNAPGA FSASGVYPIA ERVTGTIIDP IDGVTRIVSY RHLDGYPLAV MVGLSQTEEF ADYTHTRNVY LLMTSFITLA MLAFFGVATG LIGKLLGRER EMTQLAEYDL LTGLANRYAT LRGLRNDVSM PASLSRLGLL FIDLDNFKTV NDTLGHNAGD IVLQMTASRL ADAVGDEGSL ARIGGDEFVV VMKGDDVERR AVRLAEAIIR MFGEPFDVRG SSFVLHASIG IALHTVANES EIDLLKKADL AMYSAKDAGK NCYQFYAPHL SHRADHLMRW EQQLRVALAE GQLFLAYQPK IDLTHRTITG FEALARWDHP EHGVISANEF ISIAESTGLI VPIGDFVIRT ACEQIARWRD EGHDTLTLAV NISPVQFWRG DLIETISQAL QDTGIPANRL EIEITETAMM EYPELVSEKI VALKKLGIRI ALDDFGTGYS SLSYLHRFSV DTLKVDRSFV QAIPNDRSVC VMVSSIVHLA RSLGLTVVVE GTETEEQITW LSALGEIEAQ GFLFSRPVPA DAIPALIARF GVRGEHPNVV AHRATGSTGA
|
| |