Gene Bcen2424_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2339 
Symbol 
ID4450180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2601916 
End bp2602833 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID639694403 
Productspermidine synthase-like protein 
Protein accessionYP_835983 
Protein GI116690360 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAC TGATCAAGCG CGCGTCCGCC GAGGCACGCG CGTTCAAGCA ACGCAAGCCG 
TCCGCCTACA ACGGCTCCGA AAAACTCCAG CCGCCGCGCG TGAAGCGCCG CCCGGACATC
GACGAACACG ACGACGTGCC GGTGCTCGAA GCGCCGCGCA AGCCGCGTTT CGCGCCCGTG
ACGTTCTCCG AAGAAGGCGG CGTGCGCTTC CTGCACTTCG GGACCGAGTG GGTGCAGGGC
GCGATGCGGA TCTCGAAGCC GCTGCATATC GAGCTCGAAT ACGCGCAGCA GATGATGGCC
TGGCTGCTGT TCCTCGAAAC GCCGGAGCGG ATCGTCCAGC TCGGGCTCGG CACCGGCGCG
CTGACCAAGT TCTCGCATCG TTTCCTGCCG CACGCGAAGG TCGAGGCCGT CGAGCTGAAC
CCGGCCGTGA TCGTCGCCGC GCGCACGATG TTCGCGCTGC CGCCCGACGA CGCGCGCCTC
GCGGTGCACG AAGCCGACGC ATGGGACTTC GTCAACGACC CGGCCAACCG CGGCACGGCG
GGCGCGATCC AGATCGACCT GTACGACGCG ACCGCGCGCG GCCCCGTGCT CGACAGCGTC
GCGTTCTACC GCGCGGTGCG CGGCTGCCTC GCCGATGCCG GCATCGCGAC GATCAACCTG
TTCGGCGATC ATCCGAGCTT CGTGCGCAAC ATGAAGCACC TGAATGCGGC GTTCGACCAC
CGCGTGATCG CGCTGCCCGA AGTGCACGAC GGCAACCGCA TCGCGATCGC GTTTTCGGGC
CCCGCGCTCG ACGTGCCGTT CGCCCAGCTC GACGCCCGCG CGAAGCTGAT CGAGGACACG
CTCAAGCTGC CCGCGCGCAA GTGGGTGAAA GCTTTGAAAG CAACGGACGG CGCACGCGAC
ACCGCGTTCG CGATCTGA
 
Protein sequence
MTRLIKRASA EARAFKQRKP SAYNGSEKLQ PPRVKRRPDI DEHDDVPVLE APRKPRFAPV 
TFSEEGGVRF LHFGTEWVQG AMRISKPLHI ELEYAQQMMA WLLFLETPER IVQLGLGTGA
LTKFSHRFLP HAKVEAVELN PAVIVAARTM FALPPDDARL AVHEADAWDF VNDPANRGTA
GAIQIDLYDA TARGPVLDSV AFYRAVRGCL ADAGIATINL FGDHPSFVRN MKHLNAAFDH
RVIALPEVHD GNRIAIAFSG PALDVPFAQL DARAKLIEDT LKLPARKWVK ALKATDGARD
TAFAI