Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2339 |
Symbol | |
ID | 4450180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2601916 |
End bp | 2602833 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639694403 |
Product | spermidine synthase-like protein |
Protein accession | YP_835983 |
Protein GI | 116690360 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGAC TGATCAAGCG CGCGTCCGCC GAGGCACGCG CGTTCAAGCA ACGCAAGCCG TCCGCCTACA ACGGCTCCGA AAAACTCCAG CCGCCGCGCG TGAAGCGCCG CCCGGACATC GACGAACACG ACGACGTGCC GGTGCTCGAA GCGCCGCGCA AGCCGCGTTT CGCGCCCGTG ACGTTCTCCG AAGAAGGCGG CGTGCGCTTC CTGCACTTCG GGACCGAGTG GGTGCAGGGC GCGATGCGGA TCTCGAAGCC GCTGCATATC GAGCTCGAAT ACGCGCAGCA GATGATGGCC TGGCTGCTGT TCCTCGAAAC GCCGGAGCGG ATCGTCCAGC TCGGGCTCGG CACCGGCGCG CTGACCAAGT TCTCGCATCG TTTCCTGCCG CACGCGAAGG TCGAGGCCGT CGAGCTGAAC CCGGCCGTGA TCGTCGCCGC GCGCACGATG TTCGCGCTGC CGCCCGACGA CGCGCGCCTC GCGGTGCACG AAGCCGACGC ATGGGACTTC GTCAACGACC CGGCCAACCG CGGCACGGCG GGCGCGATCC AGATCGACCT GTACGACGCG ACCGCGCGCG GCCCCGTGCT CGACAGCGTC GCGTTCTACC GCGCGGTGCG CGGCTGCCTC GCCGATGCCG GCATCGCGAC GATCAACCTG TTCGGCGATC ATCCGAGCTT CGTGCGCAAC ATGAAGCACC TGAATGCGGC GTTCGACCAC CGCGTGATCG CGCTGCCCGA AGTGCACGAC GGCAACCGCA TCGCGATCGC GTTTTCGGGC CCCGCGCTCG ACGTGCCGTT CGCCCAGCTC GACGCCCGCG CGAAGCTGAT CGAGGACACG CTCAAGCTGC CCGCGCGCAA GTGGGTGAAA GCTTTGAAAG CAACGGACGG CGCACGCGAC ACCGCGTTCG CGATCTGA
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Protein sequence | MTRLIKRASA EARAFKQRKP SAYNGSEKLQ PPRVKRRPDI DEHDDVPVLE APRKPRFAPV TFSEEGGVRF LHFGTEWVQG AMRISKPLHI ELEYAQQMMA WLLFLETPER IVQLGLGTGA LTKFSHRFLP HAKVEAVELN PAVIVAARTM FALPPDDARL AVHEADAWDF VNDPANRGTA GAIQIDLYDA TARGPVLDSV AFYRAVRGCL ADAGIATINL FGDHPSFVRN MKHLNAAFDH RVIALPEVHD GNRIAIAFSG PALDVPFAQL DARAKLIEDT LKLPARKWVK ALKATDGARD TAFAI
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