| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2311 |
|---|
| Symbol | |
|---|
| ID | 4449784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2566390 |
|---|
| End bp | 2567568 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639694375 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_835955 |
|---|
| Protein GI | 116690332 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCTGT TTTCTTCCGC CCGTCCGCCC AGAACCATCC TCGTTGCCGC GCCGCGCCGT
ATCGGCGACG TACTGTTGAC GACCCCGCTC GTACGGTCCC TGAAGGCCCG CTGGCCGGAC
GCGCAGATCG ACATGCTGGT GTTTCGCGGC ACCGAGGGCG TGCTCGAGCA CAATCCGGAC
GTGCGGCGCG TGATCGTGGT CGCGCAGCGT GCGGGATTGG GCGAGCGGCT GCGCGACGCG
CTGTCGATGT GGCGCCGCTA CGATCTCGCA TGCGCGGCGC TGAGTTCCGA CCGGCCGCGT
TTCTATAGCT GGTTCGCCGG CCGCAAACGG GTCGGCCTCG TCGACCCGAA TCGCGTCACG
TGGCTGACGC GGATGATGCT GAACGGGATC GCGATCAATC ACCACGAATC TGCCCATACG
GTCGTCAGTA CGCTGGCACT CGCGCTGGTG ATCGGCATCG AGCCGGTGTC CGAGGTCGTC
GCGCCCGGCA TCGGCGATGA TCCGGCGCGG CGCGCGCGTT TCGACGCGTG GCTCGCCGAG
TCGCCGGCGA TCCGCGCCGG CAAGCCGCTG GTCGTGCTGC ATCCGTACCC GATGTTCCGT
TACAAGCAAT GGCGGCTCGA CGGCTGGGTC GAAATGATCG GCTGGCTGCG CGAGCAGGGC
TTCGCGATCG CGCTGTCGGG CGGCCCGGCC GACAGCGAGC GCGAGTATGC GGAGCAGGTC
GCGACGGAGG CGGGCGGCGA CGTGCTGAAC CTGGTCGGCC GCCTGACGTT CGGCGAGAGC
GCGGAGCTCG TGCGGCGCGC GCGGCTCTTC ATCGGGCCCG ACACCGGCGC GACGCACGTC
GCGGCCGCGA CGGGCACCGA CACGATTGCA CTGTTCGGGC CGTCCGACCC CGTGCGTTGG
GGGCCGTGGC CGCAGCACTG GCCTGCGACC GAGAATCCGT GGGCGCTGCG CGGCTCGGGG
CGGCACGGAA ACGTGTGGCT GTTGCAGGGG GACGGAGATT GCGTGCCGTG CCGCCACGAA
GGCTGCGAGC GTCACGTCGA CAGTCGCAGC GACTGCCTCG TCCATCTGGA TGCGCAGCGC
GTGAAGGCCG CGGCAGCCGA GATGTTGGGG CTGAATCCGC CGGGGCCGGC CGACGTCATC
GTCGACACGT CGCGGCTGCG TCGTGCCGGG GCCGACTGA
|
|---|
| Protein sequence | MALFSSARPP RTILVAAPRR IGDVLLTTPL VRSLKARWPD AQIDMLVFRG TEGVLEHNPD
VRRVIVVAQR AGLGERLRDA LSMWRRYDLA CAALSSDRPR FYSWFAGRKR VGLVDPNRVT
WLTRMMLNGI AINHHESAHT VVSTLALALV IGIEPVSEVV APGIGDDPAR RARFDAWLAE
SPAIRAGKPL VVLHPYPMFR YKQWRLDGWV EMIGWLREQG FAIALSGGPA DSEREYAEQV
ATEAGGDVLN LVGRLTFGES AELVRRARLF IGPDTGATHV AAATGTDTIA LFGPSDPVRW
GPWPQHWPAT ENPWALRGSG RHGNVWLLQG DGDCVPCRHE GCERHVDSRS DCLVHLDAQR
VKAAAAEMLG LNPPGPADVI VDTSRLRRAG AD
|
|---|
| |