| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2301 |
|---|
| Symbol | |
|---|
| ID | 4449774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2555409 |
|---|
| End bp | 2556878 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639694365 |
|---|
| Product | ribonuclease |
|---|
| Protein accession | YP_835945 |
|---|
| Protein GI | 116690322 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1530] Ribonucleases G and E |
|---|
| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAG AAATCCTGAT CAACCTCACG CCGCAGGAAA CGCGCGTCGC ACTCGTCCAG
CAAGGCGCGG TGCAGGAGCT TCACGTCGAG CGCACGCTGT CGCGCGGGCG GGTCGGCAAC
ATCTATCTCG GCAAGGTCGT GCGTGTGCTG CCCGGCATGC AGTCGGCGTT CATCGACATC
GGCCTCGAAC GCGCGGCGTT CCTGCACGTC GCCGACATCT GGCATCCGCG CCTCGCGGGC
GAGCCGCAGT CGGGCGCGCC GCACCAGCCG ATCGAGAAGA TCGTGTTCGA GGGCCAGACG
CTGATGGTCC AGGTGATCAA GGACCCGATC GGCACGAAGG GCGCGCGGCT GTCGACGCAG
GTCAGTATCG CGGGGCGCAC GCTCGTCTAC CTGCCGCAGG AGCCGCATAT CGGCATCTCG
CAGAAAATCG AGAGCGAGGC CGAGCGCGAG GCCGTGCGCG CGCGCCTGAC GGCCGTGATC
CCGCCGGACG AGAAAGGCGG CTACATCGTG CGCACGATCG CCGAGGATGC GACCTCCGAC
GAACTGGCCG GCGACGTCAC GTACCTGCGC AAGACCTGGG CGACGATCGT CGCACAAGCG
CAGCGTCTAC CGGCGACGAG CCTGCTGTAT CAGGATCTCG ATCTCGCGCA GCGCGTGCTG
CGCGATTTCG CGAACGACGA CACGACGCGC ATCCAGGTCG ACTCGCGCGA GACGTACCAG
CGCCTGTCGG AATTCGCGGG CGAATTCACG CCGGCCGTGA GCCCGAAGCT GCATCACTAC
ACGGGCGAGC GGCCGCTGTT CGACCTGTAC AACATCGAGA CGGAGATCCA GCGCGCGTTG
TCGCGTCGCG TCGACCTGAA ATCGGGCGGC TACCTGATGA TCGACCAGAC CGAGGCGATG
ACGACGATCG ACGTGAACAC GGGCGGCTAT GTCGGCGCGC GCAACTTCGA CGACACGATC
TTCAAGACCA ACCTCGAGGC CGCGCATACG ATCGCGCGGC AACTGCGGCT GCGCAACCTC
GGCGGGATCA TCATCATCGA CTTCATCGAC ATGGAGAACG CCGAGCACCG CGACGCGGTG
CTGTCCGAGC TGAAGAAGGC GCTGTCGCGC GACCGCACGC GCGTGACGGT CAACGGTTTC
TCGCAGCTCG GGCTCGTCGA GATGACGCGC AAACGCACGC GCGAATCGCT CGCGCACGTG
CTGTGCGAAC CGTGCCCGAC CTGCCAGGGC AAGGGCCAGG TGAAGACGTC GCGCACCGTG
TGCTACGACA TCCTGCGCGA AATCCTGCGC GAGTCGCGGC AGTTCAACCC GCGTGAGTTT
CGCGTGATCG CCGCGCAGCA GGTGATCGAC CTGTTCCTCG ACGAGGAGTC GCAGCATCTG
GCGATGCTGA TCGACTTCAT CGGCAAGCCG GTGTCGCTGC AGGTGGAGTC GAATCTGAGC
CAGGAGCAGT ACGATATCGT GCTGATGTAA
|
|---|
| Protein sequence | MNEEILINLT PQETRVALVQ QGAVQELHVE RTLSRGRVGN IYLGKVVRVL PGMQSAFIDI
GLERAAFLHV ADIWHPRLAG EPQSGAPHQP IEKIVFEGQT LMVQVIKDPI GTKGARLSTQ
VSIAGRTLVY LPQEPHIGIS QKIESEAERE AVRARLTAVI PPDEKGGYIV RTIAEDATSD
ELAGDVTYLR KTWATIVAQA QRLPATSLLY QDLDLAQRVL RDFANDDTTR IQVDSRETYQ
RLSEFAGEFT PAVSPKLHHY TGERPLFDLY NIETEIQRAL SRRVDLKSGG YLMIDQTEAM
TTIDVNTGGY VGARNFDDTI FKTNLEAAHT IARQLRLRNL GGIIIIDFID MENAEHRDAV
LSELKKALSR DRTRVTVNGF SQLGLVEMTR KRTRESLAHV LCEPCPTCQG KGQVKTSRTV
CYDILREILR ESRQFNPREF RVIAAQQVID LFLDEESQHL AMLIDFIGKP VSLQVESNLS
QEQYDIVLM
|
|---|
| |