| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2278 |
|---|
| Symbol | |
|---|
| ID | 4449490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2532128 |
|---|
| End bp | 2532859 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639694342 |
|---|
| Product | threonyl/alanyl tRNA synthetase, SAD |
|---|
| Protein accession | YP_835922 |
|---|
| Protein GI | 116690299 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC AAGCGCTGTT TCGCGAAGAC GCGTACCTCA CGCAATGCGA GGCGATCGTC
CAGGCCATCG GCGAAGACGG CATCCGGCTC GACCGCACCG TGTTCTATCC GCTCGGCGGC
GGCCAGGCCG GCGACACCGG CACGCTGACG CTGCCCGACG GCGGCACGAT CGCGATCGCC
GACACGCGCA AGGCGAAGTT CGACGGCGCG ACGCCCGACG ACGCCGTCCA CGTGCCAGCG
TCGGGCCAGG AGGCGAGCGT CGCGACGCTC GTCCCCGGCA CGCGCGTGGT TGCTGAGATC
GACTGGCTGC GCCGCTACCG GCACATGCGT CTGCACACGG CCGCGCACCT GATGTGCGCG
GTGTTGCCGT ACGCGGTCGA CGGTTGCAGC GTGACGGCCG ACTACGTGCG GCTCGATTTC
GCGACTGCCG ACGCGATCGA CCGCGACGAC GTCGAGCGGC GCCTCGCGGG CTTCGTCGTC
GGCGCGCATC CGGTCACGAC CGAATGGATT ACCGACGACG AGATGGCCGA GCGTCCCGAA
CTCGTGCGCA CGATGAGCGT GAAGCCGCCG ATGGGCCTCG GCCGCGTGCG GCTGCTGCGC
ATCGAAAACG TCGACCTGCA GCCGTGCGGC GGCACGCATG TGCGCAACAC GTCCGAAATC
GGCGGGTTGC GGGTCGCGAA ACTGGAAAAG AAGAGTGCGC GCACACGGCG CCTCGTACTG
GAGTTTGCAT GA
|
|---|
| Protein sequence | MTTQALFRED AYLTQCEAIV QAIGEDGIRL DRTVFYPLGG GQAGDTGTLT LPDGGTIAIA
DTRKAKFDGA TPDDAVHVPA SGQEASVATL VPGTRVVAEI DWLRRYRHMR LHTAAHLMCA
VLPYAVDGCS VTADYVRLDF ATADAIDRDD VERRLAGFVV GAHPVTTEWI TDDEMAERPE
LVRTMSVKPP MGLGRVRLLR IENVDLQPCG GTHVRNTSEI GGLRVAKLEK KSARTRRLVL
EFA
|
|---|
| |