Gene Bcen2424_2247 details

Gene Information

• Locus tag: Bcen2424_2247
• ID: 4449274
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: -
• Start bp: 2502631
• End bp: 2503233
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639694310
• Product: NADH dehydrogenase subunit C
• Protein accession: YP_835891
• Protein GI: 116690268
• COG category: [C] Energy production and conversion
• COG ID: [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00797265
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGCA AAATCGAGAC CCTGAAGGCA AACCTCGAAG CCGCGCTCGG CGCGCGCGTG 
GTGAGCCTCA CCGAAGCGAT CGGTGAACTG ACGCTCGTCG TGAAGGCGAG CGATTACCTC 
GAAGTCGCAA AGACGCTGCG CGATGATCCG AAGCTCCGTT TCGAGCAACT GATCGACCTC 
TGCGGCGTCG ACTACCAGAC CTTCGGCGAC GGCGCCTACG ACGGCCCGCG CTTCGCGGCC 
GTGTCGCACC TGCTGTCGGT CACGAACAAC TGGCGCCTGC GCCTGCGCGC ATTCGCGCCG 
GACGACGATC TGCCGATCGT GGCGTCGCTG GTCGACATCT GGACCTCGGC GAACTGGTAC 
GAGCGCGAAG CGTTCGACCT GTACGGCATC GTGTTCGAAG GCCACCCCGA CCTGCGCCGC 
ATCCTCACCG ACTACGGCTT CATCGGTCAC CCGTTCCGCA AGGACTTCCC GGTGTCGGGC 
TACGTCGAAA TGCGTTACGA CCCGGAAGAG AAGCGGGTCG TGTACCAGCC GGTGACGATC 
GAGCCGCGCG AAATCACGCC GCGCGTGATC CGCGAGGATC GCTATGGCGG TCTGAAACAT 
TAA 

 

Protein sequence

MASKIETLKA NLEAALGARV VSLTEAIGEL TLVVKASDYL EVAKTLRDDP KLRFEQLIDL 
CGVDYQTFGD GAYDGPRFAA VSHLLSVTNN WRLRLRAFAP DDDLPIVASL VDIWTSANWY 
EREAFDLYGI VFEGHPDLRR ILTDYGFIGH PFRKDFPVSG YVEMRYDPEE KRVVYQPVTI 
EPREITPRVI REDRYGGLKH