| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2244 |
|---|
| Symbol | |
|---|
| ID | 4449271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2499391 |
|---|
| End bp | 2500701 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639694307 |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_835888 |
|---|
| Protein GI | 116690265 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCC TCCACGACCG TCACATCAAA CCGCTGATCC TCGCTGGTCT GAACGGCGAG
AACTGGCACC TCGAAGACTA CGTTGCGCGC GGCGGCTACA AGCAGCTGCG CCGCATTCTC
GAAGAAAAGA TTCCGCCCGA GCAGGTGATC GCCGACGTGA AGGCGTCGGG CCTGCGCGGC
CGCGGCGGTG CGGGCTTCCC GACCGGCCTG AAGTGGAGCT TCATGCCGCG TCAGTTCCCG
GGGCAGAAGT ACCTCGTCTG CAACTCGGAC GAAGGCGAGC CGGGCACGTT CAAGGATCGC
GACATCCTGC GCTGGAACCC GCACGCGCTG ATCGAAGGCA TGGCCATCGG CGCATACGCG
ATGGGCATCA CCGTCGGCTA CAACTACATC CACGGCGAGA TCTTCGAAGT GTATCGACGC
TTCGAAGCCG CGCTCGATGA AGCGCGCGCG GCCGGGTTCC TCGGCGACAA CATCATGGGC
ACGGAATTCT CGTTCCAGCT GCACGCGCAC CACGGTTACG GCGCGTACAT CTGCGGCGAG
GAAACGGCGC TGCTCGAGTC GCTCGAAGGC AAGAAGGGCC AACCGCGCTT CAAGCCGCCG
TTCCCGGCGA GCTTCGGCGT GTACGGCAAG CCAACCACGA TCAACAACAC CGAGACGTTC
GCCGCGGTGC CGTTCCTGCT GTCCATCGGG CCGCAGAATT ACCTCGAGAT CGGCAAGCCG
AACAACGGCG GCACGAAGAT TTTCTCGGTG TCGGGCGACG TCGAGCGCCC GGGCAACTAC
GAAGTGCCGC TCGGCACGCC GTTCGCGACG CTGATGGAGC TCGCCGGCGG GATGCGCGGC
GGCAAGAAGA TCAAGGCCGT GATTCCGGGC GGGTCGTCGG CGCCGGTGAT CCCGGGCGAC
ATCATGATGC AGACGGATCT CGACTACGAC TCGATCGCGA AGGCCGGCTC GATGCTCGGT
TCCGGCGCGG TGATCGTGAT GGACGAGACG CGCTGCATGG TGCGTTCGCT GCTGCGCCTG
TCGTACTTCT ACTACGAGGA ATCGTGCGGT CAGTGCACGC CGTGCCGTGA AGGCACCGGC
TGGCTGTATC GCGTCGTGAA TCGTATCGAG CACGGCGAAG GGCGCCAGGA AGATCTGGAC
CTGCTGAACT CGGTGGCCGA GAACATCATG GGCCGCACGA TCTGCGCGCT CGGCGATGCG
GCGGCGATGC CGGTTCGCGG GATGCTCAAG CACTACTGGG ACGAATTCGC GTACCACGTC
GAGCACAAGC ACTGCATGGT CGGCGGCCAC GCGCACGCGG CGGCAGCCTG A
|
|---|
| Protein sequence | MTSLHDRHIK PLILAGLNGE NWHLEDYVAR GGYKQLRRIL EEKIPPEQVI ADVKASGLRG
RGGAGFPTGL KWSFMPRQFP GQKYLVCNSD EGEPGTFKDR DILRWNPHAL IEGMAIGAYA
MGITVGYNYI HGEIFEVYRR FEAALDEARA AGFLGDNIMG TEFSFQLHAH HGYGAYICGE
ETALLESLEG KKGQPRFKPP FPASFGVYGK PTTINNTETF AAVPFLLSIG PQNYLEIGKP
NNGGTKIFSV SGDVERPGNY EVPLGTPFAT LMELAGGMRG GKKIKAVIPG GSSAPVIPGD
IMMQTDLDYD SIAKAGSMLG SGAVIVMDET RCMVRSLLRL SYFYYEESCG QCTPCREGTG
WLYRVVNRIE HGEGRQEDLD LLNSVAENIM GRTICALGDA AAMPVRGMLK HYWDEFAYHV
EHKHCMVGGH AHAAAA
|
|---|
| |