Gene Bcen2424_2189 details

Gene Information

• Locus tag: Bcen2424_2189
• ID: 4450061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: -
• Start bp: 2439663
• End bp: 2441678
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639694247
• Product: Na+/solute symporter
• Protein accession: YP_835833
• Protein GI: 116690210
• COG category: [R] General function prediction only
• COG ID: [COG4147] Predicted symporter
• TIGRFAM ID: [TIGR00813] transporter, SSS family; [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGACGC ATCGACTGAT ACGCGCATAC GCGCTCTACA CGCTCGGGTT TCTCGGCTTC 
GTGCTGCTGA TGTGGCGGAT CGAGCGCGCG ACGGGCTCGG GCGTCTGGAT CGGCTACGTG 
TTCCTGTTCG TGCCGATCGC CGTGTACGCT GTGATCGGCT TGTTGTCGCG CACGTCCGAC 
CTCGTCGAGT ACTACGTGGC CGGGCGGCGC GTGCCGTCCG CGTTCAACGG GATGGCGACG 
GCGGCCGACT GGCTGTCGGC CGCGTCGTTC ATCGGCCTGG CCGGCTCGCT CTACGCGACC 
GGCTACGACG CGCTCGCGTA CGTGATGGGC TGGACGGGCG GGTTCTGCCT CGTCGCGTTC 
CTGCTTGCGC CGTATGTGCG CAAGCTCGCG CGCTACACGA TTCCCGACTT TCTCGGCACG 
CGCTTCTCGA GCACGGCCGT GCGCGCGCTT GCAGCCGGCG CGGCGATCCT GTGTTCGTTC 
GTGTACCTGG TCGCGCAGAT CCAGGGGATC GGCCTGATCG CGACGCGCTT CATCGGCGTC 
GATTTCGCGA TCGGTATCTT CTGCGGGCTC GCGGGCATTC TGGTGTGCTC GTTTCTCGGC 
GGGATGCGCG CGGTCACGTG GACGCAGGTC GCGCAGTACA TCATCCTGAT CAGCGCGATC 
CTGATTCCGG TGTCGCTGAT CGCGATGAAG AACGGCCTCG GCCCCGTGCC GCAGTTCAAT 
TACGGCAAGC TGATGGAGCG CGTCGCGGCG CGCGAGGCGC AGGTGCGCGA CGCGCACGAC 
GAGCAGCAGG TGCGCGATGC GTATCGCCGG CAGGCCGCGG CTATCCAGAC GCGGCTCGAC 
CGGCTGCCGG CGTCCTATGC GGATGCGCGC CGGCATCTCG TCGACCAGCT TGCCGACCTG 
CGGCGTCACA ACGGGCCGCT GCGCGAGATC AGCCAGCGCG AGCGCGAACT GGCCGATTTC 
CCGCGCGATC CGGCAGCGGC GCGCGTGGCG TGGACGCAGG CGCGCGACGA CCTGCTCGCG 
CGTGCCGAGC CGCCCGTGCC GATGCACGAG CCATTTCCAG CCGCGAGCGA AGACGAACGC 
AAGCCGCGCG AGCGGAATTT CCTTGCGCTG CTGCTGTGCC TGTCGCTCGG CACCGCGAGC 
CTGCCGCACA TCCTGACGCG CTACAACACG ACCACGTCGG TCGCGTCGGC GCGGCGCTCG 
GTCGGCTGGA CGCTGTTCTT CATCGCGCTG TTCTATCTGA GCGTGCCGGT GCTCGCGGTG 
CTGATCAAGT ACGAGATCCT CGCGAATCTG GTCGGGCGGC CGTTCGCCGA ATTGCCGGCG 
TGGGTCACGC AATGGCATCA CTTCGAACCC GACCTGATCG GCGTCGTCGA GGTGATTCGC 
GACGGCATCG TGCACTGGTC GGAAATCCAG ATGCAGCCGG ACATGGTCGT GCTGGCCGCG 
CCGGAGATCG CGGGGCTGCC GTACGTGGTG TCGGGGCTGA TCGCGGCCGG TGCGCTGGCC 
GCGGCGCTGT CGACGGCGGA CGGGTTGCTG CTGACGATCG CGAATGCGCT GTCGCACGAC 
GTCTATTACT GCATGGTCGC GCCCGATGCG TCGAGCCAGC GGCGCGTGAC GATCTCGAAG 
GTGCTGCTGC TGGGGGTGGC GCTGTTCGCG TCGTATGTCG CGTCGCTCAA TACCGGGAAG 
ATCCTGTTCC TCGTCGGCGC CGCGTTTTCG CTGGCGGCGT CGAGCTTCTT TCCGGTGCTG 
GTGCTGGGGG TGTTCTGGAA GCGCACGACG ACGCGTGGCG CGATCGCCGG GATGGTGACG 
GGGTTGGCGG TGTGTGTGTA CTACATCGTG TCGACTTATC CGTTCTTCAC GCAGTTGACC 
GGGTTCGCCG GGCGTACGTG GTTCGGGATC GAGCCGATCA GCTCAGGCGT GTTCGGCGTG 
CCGGCGGGGT TCGCGGTGGC GATCGTGGTG AGTCTGTGTG ATAAGCGGCC GGATGAGTAT 
ACGCGGGCGT TGGTGGATTA CATTCGGCAT CCGTGA 

 

Protein sequence

MLTHRLIRAY ALYTLGFLGF VLLMWRIERA TGSGVWIGYV FLFVPIAVYA VIGLLSRTSD 
LVEYYVAGRR VPSAFNGMAT AADWLSAASF IGLAGSLYAT GYDALAYVMG WTGGFCLVAF 
LLAPYVRKLA RYTIPDFLGT RFSSTAVRAL AAGAAILCSF VYLVAQIQGI GLIATRFIGV 
DFAIGIFCGL AGILVCSFLG GMRAVTWTQV AQYIILISAI LIPVSLIAMK NGLGPVPQFN 
YGKLMERVAA REAQVRDAHD EQQVRDAYRR QAAAIQTRLD RLPASYADAR RHLVDQLADL 
RRHNGPLREI SQRERELADF PRDPAAARVA WTQARDDLLA RAEPPVPMHE PFPAASEDER 
KPRERNFLAL LLCLSLGTAS LPHILTRYNT TTSVASARRS VGWTLFFIAL FYLSVPVLAV 
LIKYEILANL VGRPFAELPA WVTQWHHFEP DLIGVVEVIR DGIVHWSEIQ MQPDMVVLAA 
PEIAGLPYVV SGLIAAGALA AALSTADGLL LTIANALSHD VYYCMVAPDA SSQRRVTISK 
VLLLGVALFA SYVASLNTGK ILFLVGAAFS LAASSFFPVL VLGVFWKRTT TRGAIAGMVT 
GLAVCVYYIV STYPFFTQLT GFAGRTWFGI EPISSGVFGV PAGFAVAIVV SLCDKRPDEY 
TRALVDYIRH P