Gene Bcen2424_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2172 
Symbol 
ID4449989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2419218 
End bp2420741 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content69% 
IMG OID639694229 
Producthistidine ammonia-lyase 
Protein accessionYP_835816 
Protein GI116690193 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.307198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGT TGACCCCCGG CCACCTGACC CTTCCGCAAC TGCGCCGGAT CGCCCGCGAA 
CCCGTGCAAC TGAAGCTCGA CCCGGCCAGC TTCGCGAAGA TCGACGCGGG CGCGAAGGCC
GTCGCCGACA TCGCCGCGAA GGGTGAGCCG GCCTACGGCA TCAATACGGG CTTCGGTCGT
CTGGCCAGCA CCCACATCCC GCACGACCAG CTCGAACTGC TGCAGAAGAA CCTCGTGCTG
TCGCATGCGG TCGGCGTGGG CGAGCCGATG GCGCGTTCGT CGGTGCGCCT GCTGTTGGCG
CTGAAGCTGT CGAGCCTCGG CCGCGGCCAC TCGGGCATCC GCCGTGAAGT GATGGATGCG
CTGATCACGC TGTTCAACGC CGACGTGCTG CCGCTGATCC CGGTGAAGGG TTCGGTCGGC
GCATCGGGCG ACCTCGCGCC GCTCGCGCAC ATGTCGGCCG TGCTGCTCGG CGTCGGCGAA
GTGTTCATCC GCGGCGAGCG CGCGAGTGCG CTCGACGGTC TGCGCGTCGC GGGCCTCGCG
CCGCTGACGC TGCAGGCGAA GGAAGGCCTC GCGCTCCTGA ACGGCACGCA GGCGTCGACC
GCGCTGGCGC TCGACAACAT GTTCGCGATC GAGGACCTGT ACCGCACCGC GCTCGTCGCC
GGCGCGCTGT CGGTCGACGC GGCAGCCGGT TCGGTGAAGC CGTTCGACGC GCGTATCCAC
GAACTGCGCG GCCATCAAGG CCAGATCGAC GCGGCCGCGT CGTACCGCGA ACTGCTCGAA
GGCTCGCCGA TCAACCAGTC GCACCGCGAC TGCGACAAGG TGCAGGACCC GTACAGCCTG
CGCTGCCAGC CGCAGGTGAT GGGCGCGTGC CTGGACCAGA TGCGCCATGC GGCCGACGTG
CTGCTGGTCG AAGCGAACGC CGTGTCGGAC AATCCGCTGA TCTTCCCGGA CACCGGCGAA
GTGCTGTCGG GCGGCAACTT CCACGCTGAA CCCGTCGCGT TCGCGGCCGA CAACCTCGCG
CTCGCCGCGG CGGAAATCGG CGCGCTGGCC GAGCGCCGCA TCGCGCTGCT GATCGATGCG
ACGCTGTCGG GCCTGCCCCC GTTCCTCGTG AAGGACGGCG GCGTGAACTC CGGCTTCATG
ATCGCGCACG TGACGGCCGC CGCCCTCGCG TCGGAAAACA AGACGCTCGC GCACCCGGCA
TCGGTCGACT CGCTGCCGAC CTCGGCCAAC CAGGAAGACC ACGTGTCGAT GGCGACGTTC
GCCGCGCGCA AGCTCGCCGA CATCGCGGAC AACACGAAGC ACATCCTCGC GATCGAACTG
CTGGCCGCCG CGCAGGGCGT CGACCTGCGC GCGCCGTACC ACACGAGCCC GAAGCTCGCG
CCGGTGATGG AGACGATTCG CGGCAAGGTC GCGCACTACG AACTCGACCA CTACTTCGCA
CCGGACATCG CGGTGATCGC GAAGCTGGTC GGCGAGCGCG CGTTCGCGAA GGTCGCGCCG
TTCTCGTTCG CGTCGGAACA GTAA
 
Protein sequence
MITLTPGHLT LPQLRRIARE PVQLKLDPAS FAKIDAGAKA VADIAAKGEP AYGINTGFGR 
LASTHIPHDQ LELLQKNLVL SHAVGVGEPM ARSSVRLLLA LKLSSLGRGH SGIRREVMDA
LITLFNADVL PLIPVKGSVG ASGDLAPLAH MSAVLLGVGE VFIRGERASA LDGLRVAGLA
PLTLQAKEGL ALLNGTQAST ALALDNMFAI EDLYRTALVA GALSVDAAAG SVKPFDARIH
ELRGHQGQID AAASYRELLE GSPINQSHRD CDKVQDPYSL RCQPQVMGAC LDQMRHAADV
LLVEANAVSD NPLIFPDTGE VLSGGNFHAE PVAFAADNLA LAAAEIGALA ERRIALLIDA
TLSGLPPFLV KDGGVNSGFM IAHVTAAALA SENKTLAHPA SVDSLPTSAN QEDHVSMATF
AARKLADIAD NTKHILAIEL LAAAQGVDLR APYHTSPKLA PVMETIRGKV AHYELDHYFA
PDIAVIAKLV GERAFAKVAP FSFASEQ