Gene Bcen2424_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2153 
Symbol 
ID4450214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2393998 
End bp2394972 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID639694209 
Productsterol desaturase-like protein 
Protein accessionYP_835797 
Protein GI116690174 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.135202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCACC TGATCGATGC GTTCGTGTCG GACATCCAGA CCTGGCTGTA CGTCGACGTC 
GTGCAGCCGC TCCTCTTCAA GTTCAACCTG ATGGACTATG ACGAGGACAC CTACGACGCG
CTGTACTGGG TGATCATCGG TGCGCTGCAG ATGGTGCTGA TGTTCGCGCT GCTGCGCCCG
CTCGAGGCGC TGCTGCCGGT TGAGCGCTGG AAGAACCGCC GCGCGGTGCG GGTCGACGTG
ATCTACACGG CGATCTCGAA GCTCGGCATC TACACGCTGT TCTTCTTCTT CGCGCTGCAG
CCGGTGTTCG ACAACTTCCA GGCGTGGCTG CGCCTGCACG GCGTCGCGAA CGTCAACCTC
GACTATCTGT GGCCGGGCGT CACCTCGCAG CCGATCGTCG CGTTCGCGAT CTACCTCGTC
GTGCTTGATT TCGCCGGCTA CTGGTATCAC CGCTGGCAAC ACAAGTTCGG CGTCTGGTGG
GAGCTGCACG CGGTCCATCA CAGCCAGCGC CAGATGTCGC TGTGGTGCGA CGACCGCAAC
CACCTGCTCG ACGACGTGCT GCAGTCGTGC TTCTTCGCGG CGATCGCGCT CGTGATCGGC
GTGACGCCGT CGCAGTTCGT CGTGCTCACC GCGGTCACGA ACTTCGTGCA GAGCATCCAG
CATACGAATG CGCGGCTGTC GTTCGGCTGG CTCGGCGAGC GCCTGCTCGT CAGCCCGATC
TTCCACCGCC GCCACCATGC GGTCGGCTAT GGCCACGAAG GCACCAAGTA CGGCTGCAAC
TTCGGCGTGC TGTTCCCGTG GTGGGACATG ATGTTCGGCA CCGCGTCGTG GAGCCGCTCG
GTCGAGCCGA CCGGCATCCG CGAGCAGGTC GAGGGCGTGT CCTATGGCGA CGGCTTCTGG
TCGCAGCACG GCCTGGCGTT CGTGCGGATC TTCCGGCGCC TGTTCCCCGC CAAGCGCGGC
GCGGCGTCGG CCTGA
 
Protein sequence
MLHLIDAFVS DIQTWLYVDV VQPLLFKFNL MDYDEDTYDA LYWVIIGALQ MVLMFALLRP 
LEALLPVERW KNRRAVRVDV IYTAISKLGI YTLFFFFALQ PVFDNFQAWL RLHGVANVNL
DYLWPGVTSQ PIVAFAIYLV VLDFAGYWYH RWQHKFGVWW ELHAVHHSQR QMSLWCDDRN
HLLDDVLQSC FFAAIALVIG VTPSQFVVLT AVTNFVQSIQ HTNARLSFGW LGERLLVSPI
FHRRHHAVGY GHEGTKYGCN FGVLFPWWDM MFGTASWSRS VEPTGIREQV EGVSYGDGFW
SQHGLAFVRI FRRLFPAKRG AASA