Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2118 |
Symbol | lysS |
ID | 4449280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 2351471 |
End bp | 2352997 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639694173 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_835762 |
Protein GI | 116690139 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.414372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAC CGACCCAAAC GCAGCCCGCC GTCACGGCGG ACGAAAACCA GATCATCGCC GAGCGCCGCG AGAAGCTGCG CGCGTTGCGC GAGCAAGGCG TCGCCTACCC GAACGATTTC CGCCCCGAGC ACCACGCAGC CGACCTGCAG GCCAAATTCG CCGATTCGGA CAAGGCCGCG CTCGAAGCGA ACCCGGTCGA GGTGTCGGTG GCCGGCCGCA TGATGCTCAA GCGCGTGATG GGCAAGGCGA GCTTCGCGAC GGTGCAGGAC GGCTCGGGCC AGATCCAGTT CTTCGTGACG CCGAACGACG TCGGCGCCGA CACCTACGAC GCGTTCAAGA AGTGGGACCT CGGCGACATC GTCGCCGCGC GCGGCGTGCT GTTCCGCACC AACAAGGGCG AGCTGTCGGT CCAGTGCAAG GAGCTGCGTC TGCTGTCGAA GGCGCTGCGC CCGCTGCCGG ACAAGTTCCA CGGGCTGTCC GACCAGGAAA TGCGCTACCG CCAGCGCTAC GTCGACCTGA TCGTCACGCC GGAAACGCGC GACACGTTCC GCGCCCGCAC GAAGACGATC GCGTCGATCC GCAAGTTCAT GGACAACGCC GACTTCATGG AAGTCGAGAC GCCGATGCTG CACCCGATCC CGGGCGGCGC GGCCGCGAAG CCGTTCGTCA CGCATCACAA TGCGCTCGAC ATGCAGATGT TCCTGCGCAT CGCGCCGGAG CTGTACCTGA AGCGCCTGAT CGTCGGCGGC TTCGAGCGCG TGTTCGAGAT CAACCGCAAT TTCCGGAATG AAGGCGTGTC GCCGCGTCAC AATCCGGAAT TCACGATGAT GGAGTTCTAC GCCGCGTACA CCGATTACCG CTGGCTGATG GACTTCACCG AGCAACTGAT CCGCCAGGCG GCGATCGATG CGCTCGGCAC CGCGACGATC CAGTATCAAG GCCGTGAACT CGACCTCGCG AAGCCGTTCC ATCGCCTGAC GATCACGCAG GCGATCCAGA AGTACGCACC GGACTACACC GACGGCCAGC TGTCGGACGA CGCGTTCCTG CGCACCGAAC TGAAGCGCTT CGGCGTCGAC GTGTCGCAGC CGGCGTTCCT GAACGCCGGC ATCGGCGCCC TTCAGCTCGC GCTGTTCGAG GAAACGGCCG AAGCGCAGCT GTGGGAACCG ACGTTCATCA TCGACTACCC GGTCGAGGTG TCGCCGCTCG CACGCGCATC GGATACGGTG CCGGGCATCA CCGAGCGTTT CGAGCTGTTC ATGACCGGCC GCGAGATCGC GAACGGCTTC TCGGAGCTGA ACGATCCGGA AGACCAGGCC GCGCGCTTCA AGAAGCAGGT CGAGCAAAAG GATGCGGGCG ACGAGGAAGC GATGTTCTTC GACGCCGACT ACATCCGCGC GCTCGAATAC GGGATGCCTC CGACCGGCGG CTGCGGGATC GGCATCGACC GTCTCGTGAT GCTGCTGACC GACAGCCCGA CGATTCGCGA CGTGCTGCTG TTCCCGCATC TGCGCCGCGA AGACTGA
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Protein sequence | MTEPTQTQPA VTADENQIIA ERREKLRALR EQGVAYPNDF RPEHHAADLQ AKFADSDKAA LEANPVEVSV AGRMMLKRVM GKASFATVQD GSGQIQFFVT PNDVGADTYD AFKKWDLGDI VAARGVLFRT NKGELSVQCK ELRLLSKALR PLPDKFHGLS DQEMRYRQRY VDLIVTPETR DTFRARTKTI ASIRKFMDNA DFMEVETPML HPIPGGAAAK PFVTHHNALD MQMFLRIAPE LYLKRLIVGG FERVFEINRN FRNEGVSPRH NPEFTMMEFY AAYTDYRWLM DFTEQLIRQA AIDALGTATI QYQGRELDLA KPFHRLTITQ AIQKYAPDYT DGQLSDDAFL RTELKRFGVD VSQPAFLNAG IGALQLALFE ETAEAQLWEP TFIIDYPVEV SPLARASDTV PGITERFELF MTGREIANGF SELNDPEDQA ARFKKQVEQK DAGDEEAMFF DADYIRALEY GMPPTGGCGI GIDRLVMLLT DSPTIRDVLL FPHLRRED
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