Gene Bcen2424_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2108 
Symbol 
ID4449153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2338007 
End bp2338861 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID639694163 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_835752 
Protein GI116690129 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.11451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGT GCGATTTCGA GGTCGGTCTC GACCAGCCTT TCTTCCTGAT CGCGGGTACC 
TGCGTCGTCG AATCGGAGCA AATGACGATC GACACGGCGG GCCGCCTGAA GGAGATCTGC
GAGAAGCTGA ACGTTCCGTT CATCTACAAG TCGTCCTACG ACAAGGCGAA CCGCAGCTCG
GGCAAGTCGT TTCGCGGCCT CGGAATGGAC GAGGGGCTGC GGATTCTCGG CGAGGTGAAG
CGCCAGCTCG GCCTGCCGGT GCTGACCGAC GTGCATTCGA TCGACGAGAT CGAGCAGGTC
GCGTCGGTCG TCGACGTGCT GCAGACGCCG GCATTCCTGT GCCGCCAGAC CGACTTCATC
CATGCGTGCG CGCGCTCGGG CAAGCCCGTC AACATCAAGA AGGGCCAGTT CCTCGCGCCG
CACGACATGA AGAACGTGAT CGACAAGGCG CGCGACGCGG CGCGTGACGC GGGGCTGTCG
GAAGACCGCT TCATGGCGTG CGAGCGCGGC GTCTCGTTCG GCTACAACAA CCTCGTGTCG
GACATGCGTT CGCTCGCGAT CATGCGCGAG ACGAACGCGC CGGTCGTGTT CGATGCGACT
CACTCGGTGC AGTTGCCGGG CGGGCAGGGC ACGAGCTCGG GCGGCCAGCG CGAATTCGTG
CCGGTGCTCG CCCGTGCGGC GGTCGCGACG GGCGTCGCGG GCCTCTTCAT GGAAACGCAT
CCGAATCCGG CCGAGGCGAA GTCGGACGGC CCGAACGCAG TGCCGCTGAA CCGGATGGGC
GCGTTGCTGG AGACCCTCGT CACGCTCGAC CAGGCGGTGA AGCGCAATCC GTTCCTGGAA
AACGATTTCA ATTAA
 
Protein sequence
MKLCDFEVGL DQPFFLIAGT CVVESEQMTI DTAGRLKEIC EKLNVPFIYK SSYDKANRSS 
GKSFRGLGMD EGLRILGEVK RQLGLPVLTD VHSIDEIEQV ASVVDVLQTP AFLCRQTDFI
HACARSGKPV NIKKGQFLAP HDMKNVIDKA RDAARDAGLS EDRFMACERG VSFGYNNLVS
DMRSLAIMRE TNAPVVFDAT HSVQLPGGQG TSSGGQREFV PVLARAAVAT GVAGLFMETH
PNPAEAKSDG PNAVPLNRMG ALLETLVTLD QAVKRNPFLE NDFN