Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2084 |
Symbol | |
ID | 4448903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2313787 |
End bp | 2314656 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639694139 |
Product | RNA methyltransferase |
Protein accession | YP_835728 |
Protein GI | 116690105 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00462385 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGATAC CATACGGCCA TTCTGATGAA CCGAGTCGTA TCGTAGTGGA AACTCCGCAG AACACCGCCG CGCCGTCCGA ATCGGGCGCG GCCTCGTCCC CGCCGCCGTC CGGCGGCTTC ACGTCCACCC GCTTCGTGCT CGTCGAGCCG AGCCATCCCG GCAACGTCGG GGCGGCTGCC CGCGCGCTGA AGACGATGGG CTTTTCGCGC CTCGTGCTGG TCGCGCCGCG CGTGCCGCAC GTGCAGAGCG ACCCCGAGGC GATCGCGATG GCCAGCGGTG CGGACGACGT CCTCGCGTCC GCGCATGTCG TGCCGACGCT CGGCGAAGCG CTGTCCGGCG TTCACTGGTC GATCGCGCTG ACCGCGCGCA CGCGCGAATA CGGGCCGCCG CGCCTCGCGC CGCGCGCGGC TGCCACACAG GCGAGCGCGC AGGTCGGCAC GGGCGACATC GCGCTCGTGT TCGGCAACGA GCGCACGGGT CTCGCGAACG AGCATGTCGA GCAGTGCAGC GCGCTCGCGC ACATTCCGGC CAACCCGGCC TACAGTTCGC TGAATCTCGC GCAGGCCGTG CAGGTGCTCG CATACGAGTT GCGCGTCGCG TTTCTCGAGC AGGCGAGCGA GCCGTCGGCA CAGCCGCAGG CCGAAGCCGG CACGCTCGCG CAGAGCGACG AGATCGAGCG GATGTACGTG CACCTCGAGA ACGCGTTGAT CGCGCTCGAC TTCCTCGATC CGCGCAATCC GAAGAAGCTG ATGCCGCGGC TGCGGCGCCT GTTCGCGCGC ACGGGCCTCG AGCGCGAGGA GGTCAACATC CTGCGCGGCA TCGCGAAGCA CATCCTGCTG AAGTCGGGCA AACCAGGCGG CGACGCGTAA
|
Protein sequence | MAIPYGHSDE PSRIVVETPQ NTAAPSESGA ASSPPPSGGF TSTRFVLVEP SHPGNVGAAA RALKTMGFSR LVLVAPRVPH VQSDPEAIAM ASGADDVLAS AHVVPTLGEA LSGVHWSIAL TARTREYGPP RLAPRAAATQ ASAQVGTGDI ALVFGNERTG LANEHVEQCS ALAHIPANPA YSSLNLAQAV QVLAYELRVA FLEQASEPSA QPQAEAGTLA QSDEIERMYV HLENALIALD FLDPRNPKKL MPRLRRLFAR TGLEREEVNI LRGIAKHILL KSGKPGGDA
|
| |