Gene Bcen2424_2079 details

Gene Information

• Locus tag: Bcen2424_2079
• ID: 4448898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 2309881
• End bp: 2310636
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639694134
• Product: TPR repeat-containing protein
• Protein accession: YP_835723
• Protein GI: 116690100

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.592897
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGGA GTATAACATT CCGATTTACG CCTATGAAAC CTCATCGCGG CCGCGCGCCG 
AGCGCTGCGA CCCTCGTTGC GACCACCGTC ATGGGCGTCG CGCTGACGCT TTTCGCGGCT 
CCCGCGGCGC ATGCGCAAAA GGCCCCGGCG GTCGCCGACG GCACCCCCGA AATCGACGCG 
TCGATCGCCG GCAAGCAGTG GCAGCAGGCG CTCGCGCAGC TCGACGCGCG CATCGCGTCG 
AACCCGCACG ACGTGCAGGC GCAGTTCAAG CGCGGCACCG TGCTGGCCCG CCTGAACCGC 
GACGACGACG CGATCCAGCA GTTCGTCGCG ATCACGCAGG CGTACCCCGA ACTGCCCGAG 
CCGTACAACA ACCTCGCGGC GCTCTACGCG AAGCACGGCC GCTATGACGA GGCGCGCACC 
GCGCTCGTCA CCGCGACGCA ATCGAACCCG GGCTACTCGC TCGCGTACGA GAACCTCGGC 
GATCTCTACC TGCGCCTCGC GGCCGAGTCG TACAAGCGCG CGCAATCGCT CGGCCGCACG 
AGCGGCGCGA CCGCGCAGCG CCTCGCCGAT CTGCAGAAGA TCGTGTCGCC GTCGAAAGCC 
GCGCCGAACG CCCGCGCGAC GTCGCCGGCC ACGCGCGACT ACACCGACCG CGCCGCCGCG 
AACGTGAGCA CCACCACGCT GCCGATGTCG CCGACGTTCC AGTTCAGCGG TCCGTCGGGC 
GCACTGGCGG CGCCGTACGT CGCGCCGTCG CAATAA 

 

Protein sequence

MARSITFRFT PMKPHRGRAP SAATLVATTV MGVALTLFAA PAAHAQKAPA VADGTPEIDA 
SIAGKQWQQA LAQLDARIAS NPHDVQAQFK RGTVLARLNR DDDAIQQFVA ITQAYPELPE 
PYNNLAALYA KHGRYDEART ALVTATQSNP GYSLAYENLG DLYLRLAAES YKRAQSLGRT 
SGATAQRLAD LQKIVSPSKA APNARATSPA TRDYTDRAAA NVSTTTLPMS PTFQFSGPSG 
ALAAPYVAPS Q