| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2050 |
|---|
| Symbol | |
|---|
| ID | 4449130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2274717 |
|---|
| End bp | 2275622 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639694097 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_835694 |
|---|
| Protein GI | 116690071 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.777492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGT TCAAACAGAT CGAAACGTTC GCCGCGGTCG CGGCGAAAGG CAGCCTGTCG
GCGGCTGCGC ATGCGGAAGG CGTTGCGCCG GCGATCATCG GCCGCCGCCT CGACGCGCTC
GAGGAGCGGC TCGGCGTGAA GCTGCTGGTT CGCACGACGC GCAAGCTCAC GCTGACGTTC
GAGGGTTCGG CGTTCCTCGA GGATTGCCAG CGCATCATTA ACGACATGCA GAACGCGGAA
GCGAGCGTGT CCGCGGGCGG CGTCAAGGCG AGCGGGCACC TGCGGATTTC CGCGCCGGCC
GGCTTCGGCC GGCGGCACGT CGCGCCGCTC GTGCCCGAAT TCAGCGGCGC GCATCCGGAC
GTGTCGGTCA CGCTCGACCT GTCCGACCGG ATGGTCGACC TCGTCAACGA GGGGTTCGAT
TGCGCGGTGC GGCTCGGCGA GCTGCCCGAC TCGTCGCTCG TGTCGCTGAA ACTCGGCGAG
AACCGCCGCG TGTGCGTCGC GTCGCCCGCG TATCTCGCGC GGCGCGGCAC GCCGGCCACG
CTCGCGGAAC TGGCGCGGCA CAACTGCCTC GCGCTCGCGG CGAACGCAAA CCAGCAGCGC
GGCTGGTCGT TCCAGGAGGA CGACAAGGTC GTGTCGATCC GCGTGAACGG CACGATGGAA
TGCTCGGACG GCGCGGTGCT GCACGAGTGG TGCCTCGCAG GCCATGGCCT CGCGTGGCGC
TCGTGGTGGG AAGTGGGCGA GGACATCGCG GCCGGGCGGC TCGTCAGCGT GCTCGACGCG
TTCGCCGCGC CGCCGATCGG CATCCACGCG GTGTTTCCGC AGCGCCGGCA TCTGCCGCTG
CGGGTGCGCC TGTTTCTCGA TTACCTGAAG CACACGTACG AGCGGCCCGG CTATTGGGGC
GAGTAG
|
|---|
| Protein sequence | MDRFKQIETF AAVAAKGSLS AAAHAEGVAP AIIGRRLDAL EERLGVKLLV RTTRKLTLTF
EGSAFLEDCQ RIINDMQNAE ASVSAGGVKA SGHLRISAPA GFGRRHVAPL VPEFSGAHPD
VSVTLDLSDR MVDLVNEGFD CAVRLGELPD SSLVSLKLGE NRRVCVASPA YLARRGTPAT
LAELARHNCL ALAANANQQR GWSFQEDDKV VSIRVNGTME CSDGAVLHEW CLAGHGLAWR
SWWEVGEDIA AGRLVSVLDA FAAPPIGIHA VFPQRRHLPL RVRLFLDYLK HTYERPGYWG
E
|
|---|
| |