| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2032 |
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| Symbol | |
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| ID | 4449059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 2254911 |
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| End bp | 2256050 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639694079 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_835676 |
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| Protein GI | 116690053 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.460385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCA CCCTAGCCCT TACCGAACAG CTGATCGCCC GCGCGTCCGT GACGCCCGAC
GACCAGCACT GCCAGCAGAT CATGACCGAG CGCCTCGCCG CGCTCGGCTT CGAATGCGAG
ACCATCGCGT CGCACGGCGT GACCAACCTG TGGGCCGTCA AGCGCGGCAC CGACGGCCGC
GACGGCAAGC TGCTCGCGTT CGCGGGCCAT ACCGACGTCG TGCCGACCGG CCCGCTCGAA
CAGTGGACCT CGCCGCCGTT CGTCCCCGCC CATCGCGACG GCAAGCTGTA CGGCCGCGGC
GCGGCCGACA TGAAGACGTC GCTCGCGGCG TTCGTCGTCG CCTCCGAGGA ATTCGTCGCG
GCGCATCCGG ACCACCGCGG CGCGATCGCG TTCCTGATCA CGAGCGACGA GGAAGGCCCG
GCCACCGACG GCACCGTGAA GGTCGTCGAG CTGCTGCAGG AACGCGGCGA GCGGCTCGAC
TACTGCATCG TCGGCGAGCC GACGTCGACC GCCGAGCTCG GCGACGTCGT CAAGAACGGC
CGCCGCGGGT CGATGTCCGG CGAACTGGTC ATCAAGGGCG TGCAAGGCCA CATTGCCTAT
CCGCACCTCG CGAAGAACCC GATCCACCTG CTCGCGCCGG CGCTCGCCGA GCTCGCCGCC
GAGCAATGGG ACGCCGGCAA CGAATACTTC CCGCCGACCA CCTGGCAGGT GTCGAACCTG
CACGCTGGCA CCGGCGCGAC CAACGTGATC CCGGGCCACG CCGACCTGCT GTTCAACTTC
CGCTTCTCGA CCGCGAGCAC CGTCGAAGGC CTGCAGGCCC GCGTGCACGC GATCCTCGAC
AAGCACGGCC TCGAATACAC GCTGAAGTGG TCGGTGAGCG GCCTGCCGTT CCTCACGCCG
CGCGGTGAAC TGTCGGGCGC GCTGGAACAC GCGATCCGCA CCGAGACCGG TATCACGACC
GAGCTGTCGA CGACGGGCGG CACGTCGGAC GGCCGCTTCA TTGCGCGCAT CTGCCCGCAG
GTGATCGAGT TCGGCCCGCC GAACGGCAGC ATCCACAAGA TCGACGAGCA CATCGAAGTG
CGCTTCGTCG ACCCGCTGAA GAACGTGTAC CGACGCGCGC TCGAACAACT GATCGCCTGA
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| Protein sequence | MSATLALTEQ LIARASVTPD DQHCQQIMTE RLAALGFECE TIASHGVTNL WAVKRGTDGR
DGKLLAFAGH TDVVPTGPLE QWTSPPFVPA HRDGKLYGRG AADMKTSLAA FVVASEEFVA
AHPDHRGAIA FLITSDEEGP ATDGTVKVVE LLQERGERLD YCIVGEPTST AELGDVVKNG
RRGSMSGELV IKGVQGHIAY PHLAKNPIHL LAPALAELAA EQWDAGNEYF PPTTWQVSNL
HAGTGATNVI PGHADLLFNF RFSTASTVEG LQARVHAILD KHGLEYTLKW SVSGLPFLTP
RGELSGALEH AIRTETGITT ELSTTGGTSD GRFIARICPQ VIEFGPPNGS IHKIDEHIEV
RFVDPLKNVY RRALEQLIA
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