Gene Bcen2424_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2030 
SymboldapD 
ID4449057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2253625 
End bp2254452 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content65% 
IMG OID639694077 
Product2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
Protein accessionYP_835674 
Protein GI116690051 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAAC AACTTCAGCA AATCATCGAT ACCGCCTGGG AAAACCGCGC CGAGCTGTCG 
CCGAAGGCCG CGCCCGCGGA CGTCCGCGAA GCCGTCGCTC ACGCGATCGA GCAACTCGAC
AAGGGTGCAC TGCGCGTCGC CGAGAAAATC GACGGCAACT GGACGGTCCA CCAGTGGCTG
AAGAAGGCCG TGCTGCTGTC GTTCCGCCTG GAGGACAACG CGCCGATGCC GGCCGGCGGC
TACTCGCAGT TCTACGACAA GGTGCCGTCG AAGTTCGCGA ACTACACGGC CGAAGACTTC
GCCGCGGGCG GCTTCCGCGT CGTCCCGCCG GCCATCGCGC GCCGCGGCTC GTTCATCGCG
AAGAACGTCG TGCTGATGCC GTCGTACACC AACATCGGCG CGTACGTCGA CGAAGGCACG
ATGGTCGACA CGTGGGCCAC GGTCGGTTCG TGCGCGCAGA TCGGCAAGAA CGTGCACCTG
TCGGGCGGCG TCGGTATCGG CGGCGTGCTC GAGCCGCTGC AGGCGAATCC GGTCATCATC
GAAGACAACT GCTTCATCGG CGCGCGCTCG GAAGTCGTCG AAGGCGTGAT CGTCGAGGAA
AACTCGGTGA TCTCGATGGG CGTGTACCTC GGCCAGAGCA CGAAGATCTA CGATCGCGAG
ACGGGCGAAG TCAGCTACGG CCGCATCCCG GCCGGCTCGG TCGTCGTCGC CGGCAACCTG
CCGTCGAAGG ACGGTTCGCA CAGCCTGTAC TGCGCGGTGA TCGTCAAGAA GGTCGACGCG
AAGACGCGTG CGAAGGTCGG CCTGAACGAG CTGCTGCGAG GCGACTGA
 
Protein sequence
MSQQLQQIID TAWENRAELS PKAAPADVRE AVAHAIEQLD KGALRVAEKI DGNWTVHQWL 
KKAVLLSFRL EDNAPMPAGG YSQFYDKVPS KFANYTAEDF AAGGFRVVPP AIARRGSFIA
KNVVLMPSYT NIGAYVDEGT MVDTWATVGS CAQIGKNVHL SGGVGIGGVL EPLQANPVII
EDNCFIGARS EVVEGVIVEE NSVISMGVYL GQSTKIYDRE TGEVSYGRIP AGSVVVAGNL
PSKDGSHSLY CAVIVKKVDA KTRAKVGLNE LLRGD