Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2024 |
Symbol | |
ID | 4448980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2242818 |
End bp | 2244893 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639694071 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_835668 |
Protein GI | 116690045 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGAA CCCAAGCCGA ACCGCCAGCC AGCCAGCCCG ACGCGCGCGC CGCGTGGCTG CGCGACCAAC TCGAGCGGGC GAACTACGCC TACTACGTGC TCGACCAGCC GGATCTGCCC GACGCCGAAT ACGACCGGCT GTTCCGCGAG TTGCAGCAGC TCGAAACCGA CCATCCCGAA CTCGTGACAC CCGATTCGCC GACGCAGCGT GTCGGCGGCG AAGCGGCCGG CGGCTTCACG CCGGTCGTCC ACGATGCGCC GATGCTGTCG CTGAACAACG GCTTTGCCGA CGAGGACATC GTCGCGTTCG ACAAGCGCGT CGCCGACGCG CTCGCCAAGA CGACCGATCT GGCCGGCTCG GTGACCGACC CCGTCGAATA CGCGTGCGAA CTGAAGTTCG ACGGCCTGGC GATCTCGCTG CGCTACGAGC AAGGCGTGTT CGTGCAGGCC GCGACGCGTG GCGACGGGAC GACGGGCGAG GACGTGACCG AGAACGTGCG CACGATCCGC TCGATTCCGC TGAAGCTGAA GGGCAAGCAC GTGCCGGCGG TGCTCGACGT ACGCGGCGAG GTGCTGATGT TCAAGCGCGA TTTCGCACGC CTGAACGAAC GCCAGCGCGC GGCCGAGCAG CGCGAATTCG CGAACCCGCG CAACGCAGCG GCCGGCAGCC TGCGCCAGCT CGACTCGAAG ATCACCGCGC AGCGGCCGCT GTCGTTCTTC GCGTACGGGA TCGGCGTGCT CGACGGGATG CCGATGCCCG ACACGCACAG CGCGCTGCTC GACTGGTACG AGTCGCTCGG CCTGCCGGTG AATCGGGAGC GCGCGGTCGT GCACGGCGCC GAAGGCTTGC TCGACTTCTT CCGCAAGGTC GGCGAGAAGC GCGAGTCGCT GCCGTACGAC ATCGACGGCG TCGTCTACAA GGTCAACCGG CGCGACGAGC AGGAGCGGCT CGGCTTCGTG TCGCGTGCGC CGCGCTTCGC GCTCGCGCAC AAGTTCCCCG CGCAGGAAGC GCTGACGAAG CTCGTCGCGA TCGACGTGCA GGTCGGCCGC ACCGGTGCGA TCACGCCGGT CGCGCGTCTC GAGCCGGTGT TCGTCGGCGG CGCGACCGTG ACCAATGCGA CGCTGCACAA CGAGGACGAA GTGCGCCGCA AGGACATCCG GATCGGCGAC ACCGTGATCG TGCGGCGTGC GGGCGACGTG ATTCCGGAAG TCGTCGGCGC GCTGCTCGAC CGGCGCCCGG CGGATGCGGC CGAATTCGTG ATGCCGACCG AATGCCCGGT GTGCGGCTCG AAGATCGAGC GCCTGCCGGA CGAGGCGATC GCGCGCTGCA CGGGCGGGCT GTTCTGCCCG GCGCAGCGCA AGCAGGCGCT GTGGCATTTC GCGCAACGCC GCGCGCTCGA CATCGACGGC CTCGGCGAGA AGATCATCGA CCAGCTCGTC GAGCTGAATC TCGTGCGCAC GCCGGCCGAC CTGTTCAATC TGGGCTTCGC GACGCTGGCC GAACTCGACC GGTTCGCCGA GAAGTCCGCG CAGAACCTGA TCGATTCGCT CGAGAAGGCC AAGCATACGA CGCTCGCGCG CTTCATCTAC GGGCTCGGCA TCCGCCATGT CGGCGAATCG ACCGCGAAGG ATCTCGCGAA GCATTTCGGC TCGCTGACGC CGATCATGGA CGCGTCGATC GAGGAACTGC TCGAAGTCAA CGACGTCGGG CCGATCGTGG CCGAGTCGCT CCACCAGTTC TTCGCGGAGG AGCACAACCG GACCGTGATC GAGCAGTTGC GCGCGCCGGG CAAGGTCACG TGGCCCGAAG GGCCGCCCGC GCCGAAGGCG CCGCAGGGCG TGCTGGCCGG CAAGACGGTC GTGCTGACGG GCACGCTGCC GAATCTCACG CGCGATGCGG CGAAGGAGAT GCTCGAAGCG GCGGGCGCGA AAGTGGCCGG TTCGGTGTCG AAGAAGACGG ATTACGTGGT CGCGGGCGCC GAAGCCGGCA GCAAGCTCGC GAAGGCCGAG GAACTCGGCA TCCCCGTGCT GGACGAAGAT GGTCTGCACC AACTCCTGGA GGGCAATACG CCATGA
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Protein sequence | MARTQAEPPA SQPDARAAWL RDQLERANYA YYVLDQPDLP DAEYDRLFRE LQQLETDHPE LVTPDSPTQR VGGEAAGGFT PVVHDAPMLS LNNGFADEDI VAFDKRVADA LAKTTDLAGS VTDPVEYACE LKFDGLAISL RYEQGVFVQA ATRGDGTTGE DVTENVRTIR SIPLKLKGKH VPAVLDVRGE VLMFKRDFAR LNERQRAAEQ REFANPRNAA AGSLRQLDSK ITAQRPLSFF AYGIGVLDGM PMPDTHSALL DWYESLGLPV NRERAVVHGA EGLLDFFRKV GEKRESLPYD IDGVVYKVNR RDEQERLGFV SRAPRFALAH KFPAQEALTK LVAIDVQVGR TGAITPVARL EPVFVGGATV TNATLHNEDE VRRKDIRIGD TVIVRRAGDV IPEVVGALLD RRPADAAEFV MPTECPVCGS KIERLPDEAI ARCTGGLFCP AQRKQALWHF AQRRALDIDG LGEKIIDQLV ELNLVRTPAD LFNLGFATLA ELDRFAEKSA QNLIDSLEKA KHTTLARFIY GLGIRHVGES TAKDLAKHFG SLTPIMDASI EELLEVNDVG PIVAESLHQF FAEEHNRTVI EQLRAPGKVT WPEGPPAPKA PQGVLAGKTV VLTGTLPNLT RDAAKEMLEA AGAKVAGSVS KKTDYVVAGA EAGSKLAKAE ELGIPVLDED GLHQLLEGNT P
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