Gene Bcen2424_2009 details

Gene Information

• Locus tag: Bcen2424_2009
• Symbol: lpxD
• ID: 4448965
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: -
• Start bp: 2224770
• End bp: 2225864
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639694056
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_835653
• Protein GI: 116690030
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTGA CGCTTGAGGA ACTCGTAAAA CGGTTCGGCG GCGAGATCGC CGGCGACGCA 
CAGTGCAAGG TGGGCGGGCT CGCACCGCTC GACCAGGCGG GCCCTCAGCA GCTCGCGTTC 
CTCGCGAACC CGAAGTACCT GTCGCAGGTC GAGTCGACCC GCGCCGGTGC GGTCCTGATC 
GCACCGAAGG ATCTGGAAAA GCTGGGTGCG GCCGCTCAAG GCCGGACGGC CGGCCCCCGC 
AACTTCATCG TGACGCCGAA TCCGTACGCG TACTTCGCGC GCGTCGCGCA GATGTTCATC 
GATCTCGCCA CGCCGCCGCG CGCGGCCGGC GTGCATCCGA GCGCGACGAT CGATCCGGCC 
GCGAAGGTCG CCGCGACCGC GGTGATCGGC CCGCACGTGA CGATCGAGGC CGGCGCGGTG 
ATCGAAGACG GCGTGCAGCT CGACGCGAAC GTGTTCGTCG GCCGCGGCAC GACGATCGGC 
GCCGGCTCGC ATTTTTATCC GAACGCATCG GTGTACCACG GCTGCAAGGT CGGCCCGCGC 
GCGATCGTCC ATGCGGGCGC CGTGATCGGT TCCGACGGCT TCGGCTTCGC ACCGGATTTC 
GTCGGTGACG GCGACGCGCG CACCGGCAGC TGGGTCAAGA TCCCGCAGGT CGGCGGCGTG 
ACGATCGGCC CGGACGTCGA AATCGGCGCG AACACGACGA TCGATCGCGG TGCGATGGCG 
GATACCGTCA TCGAGGAATG CGTGAAGATC GACAACCAGG TCCAGATCGG CCACAACTGC 
CGGATCGGCG CGTACACGGT GATCGCCGGC AGCGCCGGCA TCGCGGGCAG CACGACGATC 
GGCCGCCACT GCATGATCGG TGGCGCGGCC GGGATCGCCG GCCACGTGAC GCTCGGCGAC 
TATGTGATCA TCACCGCGAA GTCGGGCGTA TCGAAGTCGC TGCCGAAGGC CGGCATCTAT 
ACCAGCGCGT TTCCGGCCGT CGACCACGGC GAATGGAACA AGAGCGCCGC GCTCGTGCGC 
AACCTCGACA AGCTGCGCGA GCGCATCAAG GCGCTCGAAG CCGCGCTCGC CGCCCAGGGC 
GGCACCGACG CCTGA 

 

Protein sequence

MALTLEELVK RFGGEIAGDA QCKVGGLAPL DQAGPQQLAF LANPKYLSQV ESTRAGAVLI 
APKDLEKLGA AAQGRTAGPR NFIVTPNPYA YFARVAQMFI DLATPPRAAG VHPSATIDPA 
AKVAATAVIG PHVTIEAGAV IEDGVQLDAN VFVGRGTTIG AGSHFYPNAS VYHGCKVGPR 
AIVHAGAVIG SDGFGFAPDF VGDGDARTGS WVKIPQVGGV TIGPDVEIGA NTTIDRGAMA 
DTVIEECVKI DNQVQIGHNC RIGAYTVIAG SAGIAGSTTI GRHCMIGGAA GIAGHVTLGD 
YVIITAKSGV SKSLPKAGIY TSAFPAVDHG EWNKSAALVR NLDKLRERIK ALEAALAAQG 
GTDA