| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2004 |
|---|
| Symbol | |
|---|
| ID | 4448458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2220724 |
|---|
| End bp | 2221506 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639694051 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_835648 |
|---|
| Protein GI | 116690025 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCA TCACTTCCCG CGACAATCCG CTGTACAAGC GCCTGAAGGC GCTCGCGGGT
TCGACGCCCC ATCAGCGCCG CAGCGGCCAG GCGCTGCTCG AAGGCTTCCA TCTGGCAAGC
GCGTACCTCG ATACGGGCGC GACGCCCGAG CTGTGCGTCA CGACCGAAGG CGCGCTCGGC
CACGCCGAGG CGCAGGCGAT CGTCGCACGC ATCGACGCGC AGCGGATCGT CACGCTGCCG
GACGCGCTGT TCGGGCAGTT GTCGAACGTC GTCAACGGCG TCGGCTTCCT GCTGCTGGTC
GACCGGCCGG CGCACCCGCT GCCCGAACGC GTGACGCACA CGTCGGTCGT GCTCGACGGC
GTGCAGGATG CCGGCAACGT CGGCTCGATC CTGCGCAGCG CGGCGGCGGC CGGCGTGCGT
CACGTGTTCT GCGCGCCGGG GACGGCCTAT GCGTGGTCGT CGAAGGTGCT GCGCTCGGGC
ATGGGCGCGC ATTTCCTGCT GTCGATCCAT GAGGACGTCG AAGCTGAGGC GCTGGCCGAA
CGCCTCGACG TCCCGGTCGC GCTGACCGAC TCGCACGGCG CGCAGGCGGT CTACGACTGC
GACCTGTCGG GACCTGTCGC CTGGGTGTTC GGCAACGAAG GTGCCGGCGT GTCGGCATTC
TGGCGCGACG CGGCCACGCA TCGCGTGACG ATTCCGCAGC CGGGCGGGAT GGAGTCGCTG
AACGTCGCGG CGGCGGCGGC AGTGTGCCTG TTCGAGCAGG TACGGCAGCA GCGGCCGGCG
TGA
|
|---|
| Protein sequence | MKSITSRDNP LYKRLKALAG STPHQRRSGQ ALLEGFHLAS AYLDTGATPE LCVTTEGALG
HAEAQAIVAR IDAQRIVTLP DALFGQLSNV VNGVGFLLLV DRPAHPLPER VTHTSVVLDG
VQDAGNVGSI LRSAAAAGVR HVFCAPGTAY AWSSKVLRSG MGAHFLLSIH EDVEAEALAE
RLDVPVALTD SHGAQAVYDC DLSGPVAWVF GNEGAGVSAF WRDAATHRVT IPQPGGMESL
NVAAAAAVCL FEQVRQQRPA
|
|---|
| |