Gene Bcen2424_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1986 
Symbol 
ID4448432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand+ 
Start bp2202537 
End bp2203166 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content66% 
IMG OID639694033 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_835630 
Protein GI116690007 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCCA GTCAGATCGC ACTCGTCTAC GGCACCTATC TCGTCGCCAC AGCCAGCCCC 
GGGCCGAGCA ACATGGCGAT CATGGCAACA GCGATGCGTG ACGGCCGTCT GCCGGCCCTC 
GTGCTGGCCG CCGGCGTCAT CACGGGCTCG CTCTTCTGGG CGATCCTGGC GGCGACCGGC 
GTTTCCGCCG TGCTGGCGGC CTATGCCGAG GCACTCGTCG TGATCAAGAT GGTTGGCGGT 
GTCTATCTGC TCTACCTGGC GTTCCGCACG GGCAGGTCGG CGCTGAAACC GGGCCCCGGC 
TTCGCGAAGA TGGAACCCGG ACGCCCGACA CCGCCCTATC GGCGACTCTA CCGTCAGGGC 
ATTCTCATGC ATATCGGAAA CCCGAAGGCG GTTCTGGCCT GGATGGCCAT CATGTCCCTC 
GGGCTTCAGG AACACGCGTC CGGCGGCACC TTGCCGGCGA TCATCGGCGG TTGCGCGCTC 
CTCGGCGTCA TCGTGTTTGG CGGTTATGCG GTCCTCTTCT CGACCGCTCG GATGATCGCC 
GTGTATGCCC GCCTCCGGCG CTGGATTGAA GGCACGCTAT CCGCGGTGTT CGCCGTTGCG 
GGAGTCAACC TGCTTGCCTG GCAACGTTGA
 
Protein sequence
MIASQIALVY GTYLVATASP GPSNMAIMAT AMRDGRLPAL VLAAGVITGS LFWAILAATG 
VSAVLAAYAE ALVVIKMVGG VYLLYLAFRT GRSALKPGPG FAKMEPGRPT PPYRRLYRQG 
ILMHIGNPKA VLAWMAIMSL GLQEHASGGT LPAIIGGCAL LGVIVFGGYA VLFSTARMIA 
VYARLRRWIE GTLSAVFAVA GVNLLAWQR