Gene Bcen2424_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1970 
Symbol 
ID4448276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2188155 
End bp2189390 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content70% 
IMG OID639694017 
Productmajor facilitator transporter 
Protein accessionYP_835614 
Protein GI116689991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGCC ACATGCCGGA TTCCCGATAC CGCTGGGTGA TCGTCGCCGC GGGCGGCTTG 
ATGGGCTGCG TCGCGATCGG CGCGATGTTC TCGTTGCCGG TGTTCCTGCG ATCCATCGCG
CGCGATACAG GCTGGTCGAT GACCGGCATT TCCGCGGCGA TGACGCTCGG CTTCATCGCG
ATGGCGTTCG CCAGCATGGC GTGGGGCAGC CTGTCGGACC GCGTCGGCAC GCGGCCCGTC
GTCATCGCGG GCGCCGTGCT GTTGTCGGCG AGCCTGGCGT TGGCGAGCCG CGCGCCGTCG
CTGCTCGTGT TCCAGTTGAC CTTCGGCCTG GCCGTGGGCA GTGCGACGGC CGCGATATTC
GCACCGATGA TGGCGTGCGT GACCGGCTGG TTCGACACGC ACCGCAGCCT CGCGGTATCG
CTCGTGTCGG CCGGCATGGG GATGGCGCCG ATGACGATGG CGCCGCTGGC CGCCTGGCTC
GTGTCGGTGC GCGACTGGCG CACGTCGATG CTGCTGATCG CCGCGCTGGC GGCCGTCGTG
ATGATCCCGG TGTCGCTGCT GGTGCGCCGG GCGCCCGCGC TCGATCCTGC ATCCGCCCAC
GCGGCGCCTG CGCCTGCGTC GGCCGGCGCG CCCGCCGCGA TGTCGGTCGC GGATGCGCTG
CGTTCGCCGC AGTTCATGGT GTTGGTGCTG ACCAATTTCT TCTGCTGCGC GACCCATTCG
GGCCCGATCT TCCATACGGT CAGCTACGCG GTGACCTGCG GGATTCCGCT GATCGTCGCG
GTATCGATCT ACAGCGTCGA AGGGCTGGCG GGCATGGGCG GCCGGATCGC GTTCGGGGTC
CTCGGCGATC GCCTCGGCGC GAAGCGCATG CTGGTGGCGG GGCTGCTCGC GCAGGCGCTC
GGCGCGCTCG GCTACTACTT CGTGCGCACG CTCGACGGCT TCTACGCGGT CGCGACGCTG
TTCGGCTTCA TCTATGCGGG CGTGATGCCG CTGTATTCGG TGCTCGCGCG CGAGAATTTT
CCGCTGCGGA TGATGGGCAC CGTGATCGGC GGCTGCGCGA TGGCCGGCAG CCTCGGGATG
GCCGCGGGCC CGGTCGCCGG CGGGCTGATC GTCGATGCGT TGGGCAGCTA CGGCTGGCTG
TACCTCGGCT CGTTCGCGAT CGGGCTCGGC GCGTTCCTGA TCGCGACGAT GTTCCGCCCG
TTCGCGAAGG CGCAGCCGGA AACGGTGACG GCGTAA
 
Protein sequence
MTRHMPDSRY RWVIVAAGGL MGCVAIGAMF SLPVFLRSIA RDTGWSMTGI SAAMTLGFIA 
MAFASMAWGS LSDRVGTRPV VIAGAVLLSA SLALASRAPS LLVFQLTFGL AVGSATAAIF
APMMACVTGW FDTHRSLAVS LVSAGMGMAP MTMAPLAAWL VSVRDWRTSM LLIAALAAVV
MIPVSLLVRR APALDPASAH AAPAPASAGA PAAMSVADAL RSPQFMVLVL TNFFCCATHS
GPIFHTVSYA VTCGIPLIVA VSIYSVEGLA GMGGRIAFGV LGDRLGAKRM LVAGLLAQAL
GALGYYFVRT LDGFYAVATL FGFIYAGVMP LYSVLARENF PLRMMGTVIG GCAMAGSLGM
AAGPVAGGLI VDALGSYGWL YLGSFAIGLG AFLIATMFRP FAKAQPETVT A