| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1967 |
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| Symbol | ldcA |
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| ID | 4448273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 2185839 |
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| End bp | 2186777 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639694014 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_835611 |
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| Protein GI | 116689988 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTCC AGCCCGCCGC GTCCTACACC ATCCGCCTGC TGGCGCCGTC CGGCTATCCG
CACGACCCCG ACGCGATCAA CCGCGCGCTC GAGCGCCTCA GCACCGCGCA GCAGCGCATC
GAGAACATCG AGGCGACGCA GCGGCGCTTC CAGCGTTTCG GCGGCACCGA CGGCGAACGG
GCAGGCGACC TGAACCGCCT CGCCGATCCC GGGCGGCCGC TGCCGGACAT CGCGCTCGCG
GTGCGCGGCG GCTACGGCGC CGCGCGCATT CTGCACGGGC TCGACTATCG CGGGCTCGAA
CGCCGGCTGC GCGACCAGCC GATCGCGCTC GTCGGTCACA GCGATTTCAC GGCGATCCAG
CTGGCGCTGT ACGCGAAGGC GCGCATCAAG ACGTTCGGCG GTCCGATGCT GTCGGCGGAT
TTCGGCGCCG AAACGCCGAG CGACTTCACG ATGCAGCATT TCTGGCAGAC GCTGACGCAG
CCCAGCACGA CGATCGTCGC CGATGCACCG CAGGTGCAGA CGGCGAACGT GACGGGCACG
CTGTGGGGCG GCAACCTCGC GATCCTCACG TCGCTGGTCG GCACGCCGTA CATGCCCGAC
ATCGAGGGCG GCATCCTGTT CATCGAAGAC GTCAACGAGC AGCCGTTCCG GATCGAGCGG
ATGATCTATC AACTGCACCT GTCGGGGCTG CTCGCGCGGC AGCAGGCGCT CGTGCTCGGC
CAGTTCACCG GCGCGCGGCC GTTCGAGTAC GACAACGGCT ACGACATGCA GGCGATGATC
GACCAAGTGC GCGCGGTGGT CGGGATTCCG GTCGTCACCG GGCTCCAGTT CGGCCATGTG
CCCGACCTGT TGACGCTGCC GTTCGGCGCA CAGGCGCAGT TGGTCGCGAA CGCGCACGGG
TTCCGGCTGA CGCTGTCGGA CTATCCGCAT CTCGGCTGA
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| Protein sequence | MSFQPAASYT IRLLAPSGYP HDPDAINRAL ERLSTAQQRI ENIEATQRRF QRFGGTDGER
AGDLNRLADP GRPLPDIALA VRGGYGAARI LHGLDYRGLE RRLRDQPIAL VGHSDFTAIQ
LALYAKARIK TFGGPMLSAD FGAETPSDFT MQHFWQTLTQ PSTTIVADAP QVQTANVTGT
LWGGNLAILT SLVGTPYMPD IEGGILFIED VNEQPFRIER MIYQLHLSGL LARQQALVLG
QFTGARPFEY DNGYDMQAMI DQVRAVVGIP VVTGLQFGHV PDLLTLPFGA QAQLVANAHG
FRLTLSDYPH LG
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