| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1963 |
|---|
| Symbol | |
|---|
| ID | 4448269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2181245 |
|---|
| End bp | 2182198 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639694010 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_835607 |
|---|
| Protein GI | 116689984 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTCG ATCCCAACTA TCCCCGCGAC CTGATCGGCT ACGGCCGCCA TCCCGTGCAG
GCGAACTGGC CGGGGCGCGC CCGCGTCGCC GTGCAATTCG TGCTGAATTA CGAGGAGGGC
GGCGAGAACT GCGTGCTGCA CGGCGATCCG GGCTCCGAGC AGTTCCTGTC CGAAATCGTC
GGCGCGGCCG CGTATCCGGA CCGCCACATG AGCATGGAAT CGATCTACGA ATACGGGTCG
CGGGCCGGCG TGTGGCGCAT CCTGCGCGAA TTCGAGAAGC GCGGGATGCC GCTGACGGTG
TTCGGCGTCG GCATGGCGAT CGAGCGTCAT CCGGAGCTCG CGCGTGCGTT CGTCGAACTC
GGCCACGAGA TCGCGTGCCA CGGCTGGCGC TGGATTCACT ACCAGAGCAT GACGCCGGAA
CTCGAAGCCG AGCACATGCG CCTCGGGATG GAAGCGATCG AGCGCGTGAC GGGCGAGCGC
CCGCTCGGCT GGTATACCGG CCGCGACAGC CCCAACACGC ACCGCCTGGT CGCCGAATAC
GGCGGCTTCC TGTACGACTC CGACAACTAC GGCGACGACC TGCCGTTCTG GATGGACGTC
GAAGTATCGG GCGGCCGCAC GTCGCCGCAA CTGATCGTGC CGTATACGCT CGACACGAAC
GACATGCGTT TCGCGACGCC GCAGGGCTTC AATACCGGCG ATCACTTCTT CGATTACCTG
CGCGATGCGT TCGACGTGCT GTACGCGGAG GGCGACGAGG CGCCGAAGAT GCTGTCGATC
GGCATGCACT GCCGGCTGCT CGGCCGGCCG GGCCGGTTCC GCGGGCTGCA GCGGTTCCTC
GATCACATCG AGAAGCACGA TCGCGTATGG GTGACGCGCC GTGTCGATAT CGCGCGTCAC
TGGCGTGAAC ATCATCCGTA TCAGCCCAAT CATCGAAACG AAGGGAAAGC ATGA
|
|---|
| Protein sequence | MPLDPNYPRD LIGYGRHPVQ ANWPGRARVA VQFVLNYEEG GENCVLHGDP GSEQFLSEIV
GAAAYPDRHM SMESIYEYGS RAGVWRILRE FEKRGMPLTV FGVGMAIERH PELARAFVEL
GHEIACHGWR WIHYQSMTPE LEAEHMRLGM EAIERVTGER PLGWYTGRDS PNTHRLVAEY
GGFLYDSDNY GDDLPFWMDV EVSGGRTSPQ LIVPYTLDTN DMRFATPQGF NTGDHFFDYL
RDAFDVLYAE GDEAPKMLSI GMHCRLLGRP GRFRGLQRFL DHIEKHDRVW VTRRVDIARH
WREHHPYQPN HRNEGKA
|
|---|
| |